Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00557 ATGTCGCTTTCTTGTGCTAAAAACTTCTTCCAGAGGTTCTGGCAAGATGAATACCAAACGGGAAATATTCCCCATGGCAGCTTTTTGGCCAATGATGATCTTCTTCCATCTCTTGGAGCTAGAATAAACCAGGAAACTAGACTTAGAAGATACATAATCTCCCCTTTCAATCCTCGCTATAGGGCTTGGGAGTTGATACTGGTTGTTCTAGTCATATACTCAGCTTGGATTTGCCCATTTGAGTTTGCCTTTCTTCCTTACAAGGAAGATGCTCTATTCATCGTAGACAACATTGTCAATGCCTTCTTTGCCATTGACATAGTGTTGACATTCTTTGTTGCATACCTTGATCACCATTCCTATCTTCTTGTTGATGACCCAAAGAAGATTGCAATCAGGTACCTATCTACCTGGTTTGCTTTTGATCTCTGCTCAACAATACCATTTCAATCCTTCAGCTTCCTCTTCAGTCATAGCAGCGACCTTGGCTTCAAAGTTTTTAACATGTTTCGGTTATGGCGGTTGAGACGAGTCAGTGCTCTGTTTGCAAGACTTGAAAAGGACATTCGCTTCAATTATTTCTGGACTAGATGCACAAAGCTCATTGCTGTGACCTTGTTTGCAGTGCACTGTGCAGGATGCTTTAACTATCTAATTGCAGAGAGGTACCCAGATTCCAAAAGAACATGGATTGGTGCAGTGTACCCAAATTTCAAAGAAGAAAGTCTTTGGGACAGATATGTCACTTCAATATACTGGTCCATTGTCACTCTTACTACCACTGGCTATGGGGATTTACATGCTGAGAACACGAGAGAGATGCTGTTTGATATAGCTTACATGCTGTTCAACTTGGGTTTAACATCATATATCATTGGAAACATGACTAACCTTGTAGTCCACTGGACCAGCAGTACCAGAAATTTTAGGGACACAGTCAAAGCAGCTTCTGAATTTGCTTCAAGAAATCATTTGCCCCATCGCATACATGATCAAATGTTGTCACACATATGTTTGAGGTTCAAAACAGAAGGACTGAAGCAGCAAGAAACCTTGAATGATCTTCCAAAGGCAATTCGTTCAAGCATTGCACACCATCTGTTTTTTCCCGTCGTGCAAAAGGTTTACCTTTTCCAAGGAGTCTCACATGATTTCCTTTTCCAACTGGTTTCAGAAATGGAAGCCGAGTATTTCCCTCCCAAGGAAGATGTGATACTGCAAAACGAGTCTTCCACAGAACTTTATGTGCTGGTTTCAGGGGCAGTGGATCTGGTTCGCTACATCGATGGGCATGATCAGGTTCATGGGAAGTCAGTTGCAGTAGATGCATTTGGAGAGATTGGAGTTTTATATCATATACCACAGCCTTTTACAGTTCGGACCACAGAACTTTCTCAGATTTTAAGACTCAACAAAACATCCTTGATGAATGTTTTACACGCAAATCCAGGAGACGCACAAATTATAATGGATAACCTTTTAATGAGATTAAAGGGGCGTGAAGATTTCGGCTTTGAACATCCATGCACAGATTCTGGACGGGTTCCACATGAATTGCTTCAAGAAGGTAACACGAGAGGAAGCTTTTCTCACGAGTGTACCAATAATTCACATGAGCAGTCATTAATGCATGAAGGAGAGTGCATAGACATTAGGAACTCGGAGACCAGTTTGCATAAGGTGACTAATGATGATCATTTAGTCACTAAACATAACATGATCCCTGAGCATGATAGAAGAGATCCTCATGCCCCTGTAAACAAAGGGAATCTAGACATTGTTGAAATTCTGCTCGAAAGAGATGCATATCCTAACCCAAATTCCAGAGGATGGAGGCAAAAAGCTCAAGTAAAACAGCCGAAAAACAAGAGCATTTGTGACCAAAAAATGAGTTGTGAAAACGAGAAGTTAGATGAATTGAGAATAGAGATAGCGGAGCCAGAAATCCTTGACATTGACCGGAATGGCTCGACCAGAAACAGAAGACAAGATGGTATTAGATCTATCAAGTTCCCATTAGAGAAAATAAACACAAACTCCAATTCTAGAAATTCTAAGTGTCCGAGTGATAGAGAATCGGCAAGGCTCACTAAGAAGAGAGTAACAATCCACTTGCTACACGGCAGGAGTACCTCACGGGGTCAGCATGGAAAATTAATAATCCTGCCTGATTCATTAGAAGAGCTGCTCAAAATTGCTGGTGAAAAATTTGGCGGCTTCAACCCTACAAAAGTCATTAATACAGAGAATGCAGAGATAGATGACATAAATGTCATCCGAGATGGAGATCATCTCTTTCTTCTGTGCGGCGATAATGAAAATTTGAGTTCATGA 2334 0.4105 MSLSCAKNFFQRFWQDEYQTGNIPHGSFLANDDLLPSLGARINQETRLRRYIISPFNPRYRAWELILVVLVIYSAWICPFEFAFLPYKEDALFIVDNIVNAFFAIDIVLTFFVAYLDHHSYLLVDDPKKIAIRYLSTWFAFDLCSTIPFQSFSFLFSHSSDLGFKVFNMFRLWRLRRVSALFARLEKDIRFNYFWTRCTKLIAVTLFAVHCAGCFNYLIAERYPDSKRTWIGAVYPNFKEESLWDRYVTSIYWSIVTLTTTGYGDLHAENTREMLFDIAYMLFNLGLTSYIIGNMTNLVVHWTSSTRNFRDTVKAASEFASRNHLPHRIHDQMLSHICLRFKTEGLKQQETLNDLPKAIRSSIAHHLFFPVVQKVYLFQGVSHDFLFQLVSEMEAEYFPPKEDVILQNESSTELYVLVSGAVDLVRYIDGHDQVHGKSVAVDAFGEIGVLYHIPQPFTVRTTELSQILRLNKTSLMNVLHANPGDAQIIMDNLLMRLKGREDFGFEHPCTDSGRVPHELLQEGNTRGSFSHECTNNSHEQSLMHEGECIDIRNSETSLHKVTNDDHLVTKHNMIPEHDRRDPHAPVNKGNLDIVEILLERDAYPNPNSRGWRQKAQVKQPKNKSICDQKMSCENEKLDELRIEIAEPEILDIDRNGSTRNRRQDGIRSIKFPLEKINTNSNSRNSKCPSDRESARLTKKRVTIHLLHGRSTSRGQHGKLIILPDSLEELLKIAGEKFGGFNPTKVINTENAEIDDINVIRDGDHLFLLCGDNENLSS 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00557 777 Pfam KHA, dimerisation domain of potassium ion channel 699 767 IPR021789 -
Pumo2g00557 777 Gene3D Helix hairpin bin 301 367 - -
Pumo2g00557 777 Gene3D Jelly Rolls 370 502 IPR014710 -
Pumo2g00557 777 ProSiteProfiles KHA domain profile. 700 777 IPR021789 -
Pumo2g00557 777 Pfam Cyclic nucleotide-binding domain 397 480 IPR000595 -
Pumo2g00557 777 SMART cnmp_10 377 494 IPR000595 -
Pumo2g00557 777 SUPERFAMILY Voltage-gated potassium channels 55 299 - -
Pumo2g00557 777 SUPERFAMILY cAMP-binding domain-like 304 497 IPR018490 -
Pumo2g00557 777 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo2g00557 777 PRINTS EAG/ELK/ERG potassium channel family signature 107 116 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo2g00557 777 PRINTS EAG/ELK/ERG potassium channel family signature 96 106 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo2g00557 777 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo2g00557 777 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo2g00557 777 PRINTS EAG/ELK/ERG potassium channel family signature 73 80 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo2g00557 777 Pfam Ion transport protein 61 305 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pumo2g00557 777 CDD CAP_ED 377 490 IPR000595 -
Pumo2g00557 777 PANTHER POTASSIUM CHANNEL AKT1 27 498 IPR045319 GO:0005249|GO:0006813
Pumo2g00557 777 ProSiteProfiles cAMP/cGMP binding motif profile. 377 496 IPR000595 -
Pumo2g00557 777 Gene3D - 61 300 - -
Pumo2g00557 777 FunFam Potassium channel KAT2 365 501 - -
Pumo2g00557 777 FunFam Potassium channel KAT3 62 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00557 Pumo-Chr2 8982706 8986502 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00557 1 772 Ion Channels AT4G18290 58.387 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00557 K21867 - gmx:100811356 1458.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00557 2 8982706 8986502 Pumo2g00557 2 8982706 8986502 ECH