Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00544 ATGTTGCTTCGTCACTGGGCCTCCTCACTTGTTGCCAATGCTCCCACCTTCCAGAATGCGGTCCAGGAGATTATCGATTTGGGCTTCAGGCCCAGCAGAACTAACTTCTTAGTGGCTTTGCGTGCTAAGCTTTTGAGGAAATGGTTGTGGGAGAGGAAGATTCAGGTGTATAGGAAATGGGGTTGGTCTGAGGAGATTGTGCTTTCCGCCTTTGTCAGGAACCCCTGGTGTATGCTGGCTTCTGAGGAGAAAATTGAGGCCATGATGGAGTTTTGTGTCAATCGTTTGGGTTGGGATTCTTTGTTTTTTGCCAAGTATCCCGTGCTTATTCCGCTGAGTTTGGAGAAAAGGATTGTTCCCAGGGTTTTTGTGTTGCAGTTTCTTTTGTCCAAAGGTTTGGTTAAGGATGTTAAGTGGGCCATGGCGTTTAAAGTTTCTGAGAAGGACTTCTTGCGGAAGTTTGTGGTTTGCTTTGAGAAGGAAGCGGATCAGCTCTTGAAGCTCTATCAAGAGAAAAGAGATCTTCCAAGATAA 534 0.4607 MLLRHWASSLVANAPTFQNAVQEIIDLGFRPSRTNFLVALRAKLLRKWLWERKIQVYRKWGWSEEIVLSAFVRNPWCMLASEEKIEAMMEFCVNRLGWDSLFFAKYPVLIPLSLEKRIVPRVFVLQFLLSKGLVKDVKWAMAFKVSEKDFLRKFVVCFEKEADQLLKLYQEKRDLPR 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00544 177 SMART mt_12 100 134 IPR003690 GO:0003690|GO:0006355
Pumo2g00544 177 SMART mt_12 68 99 IPR003690 GO:0003690|GO:0006355
Pumo2g00544 177 Pfam mTERF 52 151 IPR003690 GO:0003690|GO:0006355
Pumo2g00544 177 PANTHER CGI-12 PROTEIN-RELATED 13 159 IPR003690 GO:0003690|GO:0006355
Pumo2g00544 177 Gene3D Transcription termination factor 3, mitochondrial 1 168 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00544 Pumo-Chr2 8790471 8791004 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pumo2g00544 mTERF 8.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00544 K15032 - gmx:102663105 278.1