Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00501 ATGAACCAGTACCACATCTACGAAGCCATCGGTCGCGGCAAATACTCCACCGTTTACAAAGGCAGGAAGAAGAAGACTATCGAGTATTTCGCCATCAAAAGCGTCGATAAATCGCAGAAAACCAAGGTCCTTGAAGAGGTCAGGATTCTTCACACATTGGATCATCTAAATGTGCTGAAGTTTTACGATTGGTATGAAACTTCTGCTCACCTATGGTTGGTTTTGGAGTACTGTGTTGGAGGGGATCTGCTTTCCATATTACGACAGGATAGTCAACTTCCTGAAGACTCGGTTCATGATCTTGCTTATGATCTAGCCAAAGCTTTGCAGTTTTTACATTCAAATGGAATAATTTATTGTGACCTGAAACCATCAAATATTCTACTAGATGAAAATGGATGTGCAAAGCTATGTGATTTTGGATTGGCTAGGAAGTTGAAAGATATATCAAAAGCTCCTTCTTCCTCGTTACCGCGAGCAAAACGTGGAACACCCTCTTACATGGCTCCGGAGCTTTTTGAGGATGGTGGAGTCCATTCTTATGCTTCTGATTTCTGGGCACTAGGCTGTGTACTGTATGAATGTTATGCTGGGAGGCCACCCTTTGTGGGAAGAGAATTCACCCAGCTTGTAAAATCCATTATTTCAGATCCAACTCCACCTCTCCCTGGTAATCCAAGCCGGCCTTTTGTCAATTTAATTAATTCCCTGTTGGTAAAAGATCCAGCTGAAAGAATACAGTGGCCTGAGCTTTGTGGACATGCCTTTTGGAGAACCAAATTTACTCTGGTGCCTCTGCCTGCTCAACCTGCATTTGATGATATGATAGAGCTACATGCTAAACCATGCTTATCAGAACGTAATGGAGATAAACCTTCGCATAACAGGACCCCTCCCAAATATCGTGAAAAAGATGTCAAGGGGGTGTTGAAGAAGGATGAGAACTCTGTTTTAGGATCTAGAGGCATTGAGACACCAACAAGGGCAACGCCAAGTGGCCACAGAACTCAGACAAAGGGTTCTGGCAGAACACATGAGGTAAAGCAGAAAGATAATTCCAATATTAGCAAGGGTGTGAATCTTTTGAGACTGTCAAGAATAGCAAAAACAAATTTACAGAGAGAAAATGAGAAGGAAAACTATCGACGCCCCTTGCCTAATAACTCTGAGAATGATTCTGAAGTTAAAATTGAGAACACTGACATGGAACTTGATTTTAATGAGAATACTGAAGATGATGCACATGAAGAAACTGATGGCGCTGAACAAACAACTCCTGTGCCTGATGAGAAAATGGACAATCATTTTCTAAACCAGGGAAAAGCAGAGGAGATTGAAAATAATACACACCAGTTGGACACCCCATCTGTTGTTCTCCCTCCAGTCTCAGATGATCCAAGGTCATTTGATCATGAATCAACTCCTGACCGTCCTGACATATCTGCTATTTCTCCCAGTGTGAGCCCTCAGGTGAAGAAACATAGAGCTAAAGAAGACTCAGGATCTGGCCTTGACTCCGATTCTTCGAGGTTGTCTAACAACCTTTCACAGGTTCTTTGGCATCCATCTGATCTCTCAGTCAGACCTGTAATGCCTAGCAGAAAAGTTGATAAAAACTCAGAAGTCATTCCATCACTCCCTTTTGAGGCATTGCAAGCGTCTGATTTTGTCAAGATGCCTAAAGAGCAATTGGAGGCAGTCCACAACCGAATATTGTCCATTTTGAATGGAAATACCAGCATTGGAGAGAAACAGAATGTGATTAGGTACCTTGAGATGTTGAGCAGTAACGCTGATGCAGCTAATATCTTGACCAATGGGCCAATAATGCTCATGCTTGTAAAATTGCTGCGTCAATCCAAGGCAGCAGCTTTGCGTGTTCAACTTGCTTCACTGATCGGTTTGTTGATTAGGCACTCCACCTTTGTTGATGACAGTTTGGCTACTTCTGGAATTTTAGGTGCACTGACTGATGGCCTCAGAGACAGGCAGGAAAAAGTAAGGAGGTTCTCCATGGCTGCTTTGGGCGAGTTACTATTTTATATATCCACTCAAAATGCGGACTGCAGGGATAACAATCAACTTGAATCACCATCAAAGGACAATAGGTCTACGAATGGCTGGCAGGTTCCAAATTCATTAATATCACTTGTGTCATCAATGTTGCGGAAGGGAGAGGATGATATAACTCAATTGTATGCATTAAGAACAATTGAGAATATTTGCAGTCAAGGAGGTTCCTGGGTGGGGCGTTTGTCCAGTCAAGATGTTATTAGTAATCTCTGCTATATCTATAGGGCGGCAGGGAAACAAGAGAGTATGAGGCTCACTGCAGGATCATGTTTGGTGCGCTTAGTTCGTTTTAATCCTCCTAGCATTCAGTCGGTTATTGAGAAACTCTCATTCAAGGACCTAGCTTCTGCTCTTGTCAAGGGCAGTCCACGAGAGCAGCAAATCAGCTTAAATCTTCTTAACATGGCAATGCTTGGAAGTCACATGTTCACAAGTATTGGAAGATACCTTGTACAACTTGCTGAGGATAAAAATCTGATCCCAAGTCTTTTGGGTCTTGTCGAGCAAGGTAGTGAAGTTTTAAGAGGAAAGGCACTTGTCCTTGTGGCTCTTCTGTGTAAGCATGGCAGGAGGTGGCTTCCACACTTCTTTTGTAGCCAAAAGTTACTTTCTGTGGTGGACAGGCTGGGAAAAGAGAAGGATGCCTATGTAAGGCAGTGTTTGGATGCATTTGTGCATATTGTGGCATCCAGTATTCCAGGTTTACTGGATATAATAACAGGGGATGTCCAGCAAATGATGGGAGGAAGGCGCCATGGACACATCTCTGCACTTACCAGCAGATCTGCTCCAAAAACTAACATTCATTTGTTTCCTGTTGTTCTTCATCTTCTTGGAACTTCAACTTTTAAGCACAAAGTCGTGACACCACAAGTCTTACGGCAGTTGGCGAATCTAATTAAACTCGTGGAGACACCGTTTCAGGGAAGAGATGACTTCCAAATAACCCTTCTTCGAATTTTCGAGTCTCTCACAGAGGAATCTCCTGTGATTCTTGGCAATCCTGACATTTTCATACGTGAAATCCTCCCTAGTTTGACAGTTCTCTACAAGGGTAACAAGGATGGTGATGCCAGATTTTTGTGCCTTAAAATTCTTTTTGATGTGATCATCATTCTTTTGAGTGAACCAATTGAAGAAGAGCAAAGATTGAAGGATCTGAAATTCGTATCAAATACCCGTTTTCTTCCTCTCTACCCGACCTTGATTGAAGATGAAGATCCTATTCCTATATATGCACAGAAGCTTCTTGTCATGCTACTGGAGTTCAGTTTTATTACAATTCCAGACATTCTACATCTGAAGACAATTTCACAATGCTTCGAGTTCTTGCTTGGAGATCTCTCAAATGCAAATGTGAATAATGTTAAGCTGTGTCTCGCTCTGGCTTCTGCCCCTGAGATGGAGTCCAAATTACTCTCTCAGTTAAAGGTGGTTAGGAGGATTGGCAACTTTCTTGAGTTTGTATATGCAAAGGGCATGGAAGATTTGCTGGAACCAACTCTCGGGCTGTGTAGGGCTTTTCTAGCACGTTCAGTCAGCTGCACAAAAGGCTTCAGCTACACAACAGAACCAACTCTCTTAGGTGACTGTCCTCCCGAGTTGAGTGGTGGTGCTGTTGATCCCCAGCAATGCATAAAAGATATAGCAGACTTTGGAAGCAATGTTGGTGTCTTGCTAGAGTTGAGTGCCTCTGCAGAAACCAGTATTGCTGATACAGCTTCTGAATGTGTCGTTTTACTGCTCAAGGCAGCTCCTAGAGAAGCCACCACTGGTATACTAACCAATCTCCCCAAGGTGACTGTGATCCTAGAGAGCTGGAATAGAGGCACTCCTCACTTGATGGTGCAGCGATTGCTTCATGCTTTAGGTTATGCTTGCAAGCAATACTTACTGCATGCAATGATATTATCAATATCCAAACCTGAGATTTCAAGAATTGAAGTCATAGTTTCTGATCTCAAAAGTTCAGGTGTTCCAGCTGTAGCCAAAACAGCTGGGCTGGCAGCCTTGGAATTGCAACGCTTGCCTCGCTGCATTTGA 4116 0.4295 MNQYHIYEAIGRGKYSTVYKGRKKKTIEYFAIKSVDKSQKTKVLEEVRILHTLDHLNVLKFYDWYETSAHLWLVLEYCVGGDLLSILRQDSQLPEDSVHDLAYDLAKALQFLHSNGIIYCDLKPSNILLDENGCAKLCDFGLARKLKDISKAPSSSLPRAKRGTPSYMAPELFEDGGVHSYASDFWALGCVLYECYAGRPPFVGREFTQLVKSIISDPTPPLPGNPSRPFVNLINSLLVKDPAERIQWPELCGHAFWRTKFTLVPLPAQPAFDDMIELHAKPCLSERNGDKPSHNRTPPKYREKDVKGVLKKDENSVLGSRGIETPTRATPSGHRTQTKGSGRTHEVKQKDNSNISKGVNLLRLSRIAKTNLQRENEKENYRRPLPNNSENDSEVKIENTDMELDFNENTEDDAHEETDGAEQTTPVPDEKMDNHFLNQGKAEEIENNTHQLDTPSVVLPPVSDDPRSFDHESTPDRPDISAISPSVSPQVKKHRAKEDSGSGLDSDSSRLSNNLSQVLWHPSDLSVRPVMPSRKVDKNSEVIPSLPFEALQASDFVKMPKEQLEAVHNRILSILNGNTSIGEKQNVIRYLEMLSSNADAANILTNGPIMLMLVKLLRQSKAAALRVQLASLIGLLIRHSTFVDDSLATSGILGALTDGLRDRQEKVRRFSMAALGELLFYISTQNADCRDNNQLESPSKDNRSTNGWQVPNSLISLVSSMLRKGEDDITQLYALRTIENICSQGGSWVGRLSSQDVISNLCYIYRAAGKQESMRLTAGSCLVRLVRFNPPSIQSVIEKLSFKDLASALVKGSPREQQISLNLLNMAMLGSHMFTSIGRYLVQLAEDKNLIPSLLGLVEQGSEVLRGKALVLVALLCKHGRRWLPHFFCSQKLLSVVDRLGKEKDAYVRQCLDAFVHIVASSIPGLLDIITGDVQQMMGGRRHGHISALTSRSAPKTNIHLFPVVLHLLGTSTFKHKVVTPQVLRQLANLIKLVETPFQGRDDFQITLLRIFESLTEESPVILGNPDIFIREILPSLTVLYKGNKDGDARFLCLKILFDVIIILLSEPIEEEQRLKDLKFVSNTRFLPLYPTLIEDEDPIPIYAQKLLVMLLEFSFITIPDILHLKTISQCFEFLLGDLSNANVNNVKLCLALASAPEMESKLLSQLKVVRRIGNFLEFVYAKGMEDLLEPTLGLCRAFLARSVSCTKGFSYTTEPTLLGDCPPELSGGAVDPQQCIKDIADFGSNVGVLLELSASAETSIADTASECVVLLLKAAPREATTGILTNLPKVTVILESWNRGTPHLMVQRLLHALGYACKQYLLHAMILSISKPEISRIEVIVSDLKSSGVPAVAKTAGLAALELQRLPRCI 1371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00501 1371 MobiDBLite consensus disorder prediction 419 434 - -
Pumo2g00501 1371 ProSiteProfiles Protein kinase domain profile. 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00501 1371 FunFam Aurora kinase A 1 81 - -
Pumo2g00501 1371 SUPERFAMILY Protein kinase-like (PK-like) 1 258 IPR011009 -
Pumo2g00501 1371 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Pumo2g00501 1371 MobiDBLite consensus disorder prediction 320 338 - -
Pumo2g00501 1371 MobiDBLite consensus disorder prediction 283 358 - -
Pumo2g00501 1371 CDD STKc_ULK4 3 257 - -
Pumo2g00501 1371 Pfam Protein kinase domain 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00501 1371 MobiDBLite consensus disorder prediction 370 385 - -
Pumo2g00501 1371 MobiDBLite consensus disorder prediction 283 318 - -
Pumo2g00501 1371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Pumo2g00501 1371 MobiDBLite consensus disorder prediction 370 397 - -
Pumo2g00501 1371 SUPERFAMILY ARM repeat 567 920 IPR016024 -
Pumo2g00501 1371 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00501 1371 Gene3D Transferase(Phosphotransferase) domain 1 1 295 - -
Pumo2g00501 1371 MobiDBLite consensus disorder prediction 446 510 - -
Pumo2g00501 1371 MobiDBLite consensus disorder prediction 410 434 - -
Pumo2g00501 1371 Gene3D - 554 917 IPR011989 -
Pumo2g00501 1371 PANTHER SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED 1 1368 IPR044591 GO:0000911|GO:0000914|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00501 Pumo-Chr2 8068988 8076754 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00501 1 246 AGC Kinase Gene Family AT1G45160 33.696 8.77e-36 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_ULK4 Pumo2g00501 Pkinase 4.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00501 K17545 - gmx:100817590 2578.13