Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00490 ATGGGGTGTGCGTTTGGGAGAGAGGCTTCGAGGGAGGAGAGGAGGGAGGAAGTGAGAGAGGCAAAAGCTGAGGAAGGTAGAGCAGAGGTTGTTGAGAATGAGAACATTGAGAAGGAGGGTGGAAGAGAGGAGAAGAGGACAAGGGCAAGGGGAGAGAGGAGGCGATCTTCGAAGCCGAATCCGAGGTTGAGCAATCCTCCTAACCATGTTCATGGTGAGCAGGTTGCAGCAGGGTGGCCCTCTTGGCTCTCTAAGGTTGCTGGTGAAGCTATCAATGGATTGACCCCTCGGAGGGCAGACACTTTTGAGAAGATTGATAAGATCGGGCAAGGTACATACAGCAATGTTTACAAAGCTAGGGATACTTTAACAGGGAAAATTGTTGCTCTAAAGAAGGTCCGATTTGACAATTTAGAGCCTGAGAGTGTGAAGTTCATGGCCAGAGAGATTTTGATTCTTCGTCGTCTGGATCATCCCAATGTCATCAAACTGGAAGGCTTAGTGACTTCTAGAATGTCATGCAGTTTATATCTTGTGTTTGAATACATGGTGCATGATCTGGCTGGACTTGCCACAAACCCAGCAATTAAGTTCACAGAGTCTCAGGTAAAATGTTACATGCACCAGCTATTTTCTGGACTGGAACATTGTCACAACCGTCATGTGCTGCATCGTGATATAAAGGGGTCGAACCTTCTTATTGACAATGATGGAATTCTTAGGATTGCTGATTTTGGATTAGCTTCCTTCTATGATCCTAATCATAAGCACCCTATGACCAGTAGAGTGGTTACTTTATGGTATCGACCTCCAGAACTTCTTCTTGGGGCCACTGAATATAGTGTTGGAGTGGACCTCTGGAGTGCTGGCTGCATTCTTGCTGAATTATTGGCTGGAAAGCCTATTATGCCTGGTCGAACGGAGGTGGAGCAGCTACACAAGATATTTAAACTATGTGGTTCTCCTTCTGACGAATATTGGAAAAAGTCAAAGTTGCCACATGCTACCATTTTTAAGCCCCAACAGTCATACAAGCGATGCATTGCAGAGACATTTAAAGATTTTCCTCCATCATCCCTGCCTCTTATTGATACCCTTCTCGCAATCGATCCAGATGAACGTTTGACTGCCACTGCTGCATTGCATAGTGAATTCTTTACAACAAAACCATATGCTTGTGAGCCCTCTAGCCTTCCAAAATATCCTCCCAGCAAGGAGATGGATGCAAAGTTACGGGATGAAGAAGCTAGAAGATTGAGAGCAGCTGGTAAAGCTAATGCTGATGGTGTCAAGAAATCTCGTCCACGTGAGCGAGTTGGGAGGGGAATTCCAGTTCCAGAGGCCAATGCTGAACTGCAAGCAAATATTGATAGACGGCGGCTGATCACACATGCAAATGCTAAGAGCAAGAGTGAGAAGTTTCCTCCTCCCCACCAAGATGGAGCTTTAGGCTATCCTTTGGGTTCTTCACATCACATGGATCCAGTTTTTGATCCTCCTGATGTTCCATTTAGTTCTACAAACTTCTCACAACCAAAAGCAAATATTCAAACCTGGTCCGGCCCGTTGGTAGATTCTGGTGTGGGCGCGCCGAGGAGAAAGAAGAAACATGGCAAGTGA 1620 0.4586 MGCAFGREASREERREEVREAKAEEGRAEVVENENIEKEGGREEKRTRARGERRRSSKPNPRLSNPPNHVHGEQVAAGWPSWLSKVAGEAINGLTPRRADTFEKIDKIGQGTYSNVYKARDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMVHDLAGLATNPAIKFTESQVKCYMHQLFSGLEHCHNRHVLHRDIKGSNLLIDNDGILRIADFGLASFYDPNHKHPMTSRVVTLWYRPPELLLGATEYSVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSDEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPPSSLPLIDTLLAIDPDERLTATAALHSEFFTTKPYACEPSSLPKYPPSKEMDAKLRDEEARRLRAAGKANADGVKKSRPRERVGRGIPVPEANAELQANIDRRRLITHANAKSKSEKFPPPHQDGALGYPLGSSHHMDPVFDPPDVPFSSTNFSQPKANIQTWSGPLVDSGVGAPRRKKKHGK 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00490 539 MobiDBLite consensus disorder prediction 7 59 - -
Pumo2g00490 539 MobiDBLite consensus disorder prediction 1 73 - -
Pumo2g00490 539 ProSiteProfiles Protein kinase domain profile. 102 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00490 539 Gene3D Phosphorylase Kinase; domain 1 90 184 - -
Pumo2g00490 539 CDD STKc_CDK9_like 102 386 - -
Pumo2g00490 539 FunFam probable serine/threonine-protein kinase At1g54610 185 426 - -
Pumo2g00490 539 FunFam probable serine/threonine-protein kinase At1g54610 89 184 - -
Pumo2g00490 539 SUPERFAMILY Protein kinase-like (PK-like) 97 391 IPR011009 -
Pumo2g00490 539 Gene3D Transferase(Phosphotransferase) domain 1 185 425 - -
Pumo2g00490 539 MobiDBLite consensus disorder prediction 421 441 - -
Pumo2g00490 539 MobiDBLite consensus disorder prediction 467 539 - -
Pumo2g00490 539 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Pumo2g00490 539 ProSitePatterns Protein kinases ATP-binding region signature. 108 131 IPR017441 GO:0005524
Pumo2g00490 539 PANTHER CELL DIVISION PROTEIN KINASE 100 390 - -
Pumo2g00490 539 SMART serkin_6 102 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00490 539 Pfam Protein kinase domain 102 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00490 539 MobiDBLite consensus disorder prediction 503 522 - -
Pumo2g00490 539 Coils Coil 14 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00490 Pumo-Chr2 7926309 7932439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00490 97 424 Core Cell Cycle Gene Families AT5G10270 50.581 1.13e-114 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pumo2g00490 Pkinase 8.9e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00490 K08819 - gmx:100779413 991.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00320 4 4566550 4571866 Pumo2g00490 2 7926309 7932439 PCT