Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00463 ATGACCGATGAACGAGAACCACAAGCTTCCCCGAGCAATGGCGTCCACAAGTTAGAAAGAAAACAAATAGTTGAAAGGGAGAAATCGCTTTTTAGAGGCAGACGTCCACGACCTGGGTTTTCTGATTCATTTTCAAGCATTGAGTTGGAAACTTTAGACATTGAAGAGGGAAGCATACCTGAGCACTCTCCTAGGAGTCAAGGGTCCGAAACCCCAAGTTCAAGGGCTAGCACTTCTGATTCGGAGAGCCAGGGATCTTTAGTAGGGACACCTAATAACAATAACCAGTGGCGTGGTTTCTTTAAACTACTGAAGAAAGGGTCCCAAATGCCTTTCCAAACTTTTCACCCACTTAAAAATGTTCCAAAACTGACAAGAAGAAAAAGCAAGAGGATAAGGGAGGACCTGATTCCATCTCTGAATTCTCCAGCTCTTCATGCATCTTTTGACACCGAGTTTGGCTGCTTCAAATCTTCCTGGAAAAACTTCACTCTCGCAGAGATCCAGGCTGCAACCAATGACTTTAGCCATGATAATTTGATTGGGGAGGGAGGCTATGCTGAGGTTTACTTAGGCAAATTGGAGGATGGAAACTTTGTTGCCATTAAACGGTTGACAAGAGGGTGCCAAGAAGAAATGACTGCAGATTTCTTGTCTGAGCTTGGCATTATAGTGCACGTGGACCACCCCAATATAGCTAGATTGATTGGATATGGTGTTGAAGGAGGAATGTTTCTTGTTCTTCAATTGTCTCCACATGGTAGCCTGTCATCCATACTTTATGGACCTAGAGAGAAACTGAATTGGAACCTCAGATATAAGATTGCTTTGGGGACTGCTGAGGGCCTTCGCTATCTGCATGAGGGGTGTCAAAGAAGGATCATTCACAAAGACATCAAGGCTTCTAATATTCTTCTCTCAGAGGATTTTGAGCCTCAGATATCTGATTTTGGGCTTGCAAAGTGGTTACCTGACCAATGGACTCACCATACTGTCTCCAAAGTGGAAGGCACATTCGGCTACCTTCCTCCTGAATTCTTCATGCATGGTATAGTAGATGAAAAGACTGATGTCTATGCTTATGGTGTGCTATTATTGGAGCTCATTACTGGTCGACAAGCTTTGGATAGCTCACAGAAAAGTCTGGTGATGTGGGCAAAACCTTTGCTAACTGCAAATAACATCAAAGAGCTTGTGGATCCAGTTTTGGCTGGTGCTTATGATGAAGAGCAGATGAAACTTGTAACCTTAACAGCTTCTCTGTGTGTAGACCAGTCCTCAATTCAGCGACCGGATATGAGCCAGGTGTTAGAGATACTAAGAGGGGAAGAAGAGAGCTTAAGAATCGTGCAAGAACGGGCCAAGTCAAAACTTCAGAGGACATACTCTGAAGAACTCTTAGATGCAGAAGAGTACAACTCAACAAAGTTTTTGAGTGAGAGGGATCGACATATGGAGACTATTCTAGGCTGCAGTAGCTCTGTCTCTGTCACAGAAGAAGGAGATAAAATCTAG 1515 0.437 MTDEREPQASPSNGVHKLERKQIVEREKSLFRGRRPRPGFSDSFSSIELETLDIEEGSIPEHSPRSQGSETPSSRASTSDSESQGSLVGTPNNNNQWRGFFKLLKKGSQMPFQTFHPLKNVPKLTRRKSKRIREDLIPSLNSPALHASFDTEFGCFKSSWKNFTLAEIQAATNDFSHDNLIGEGGYAEVYLGKLEDGNFVAIKRLTRGCQEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMFLVLQLSPHGSLSSILYGPREKLNWNLRYKIALGTAEGLRYLHEGCQRRIIHKDIKASNILLSEDFEPQISDFGLAKWLPDQWTHHTVSKVEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQKSLVMWAKPLLTANNIKELVDPVLAGAYDEEQMKLVTLTASLCVDQSSIQRPDMSQVLEILRGEEESLRIVQERAKSKLQRTYSEELLDAEEYNSTKFLSERDRHMETILGCSSSVSVTEEGDKI 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00463 504 Pfam Protein tyrosine and serine/threonine kinase 178 439 IPR001245 GO:0004672|GO:0006468
Pumo2g00463 504 MobiDBLite consensus disorder prediction 62 94 - -
Pumo2g00463 504 Gene3D Transferase(Phosphotransferase) domain 1 252 466 - -
Pumo2g00463 504 SMART serkin_6 175 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00463 504 ProSitePatterns Protein kinases ATP-binding region signature. 181 203 IPR017441 GO:0005524
Pumo2g00463 504 MobiDBLite consensus disorder prediction 1 94 - -
Pumo2g00463 504 MobiDBLite consensus disorder prediction 18 35 - -
Pumo2g00463 504 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 145 249 - -
Pumo2g00463 504 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 252 454 - -
Pumo2g00463 504 Gene3D Phosphorylase Kinase; domain 1 141 249 - -
Pumo2g00463 504 PANTHER OS08G0249100 PROTEIN 55 474 IPR046958 -
Pumo2g00463 504 SUPERFAMILY Protein kinase-like (PK-like) 160 457 IPR011009 -
Pumo2g00463 504 ProSiteProfiles Protein kinase domain profile. 175 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00463 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 294 306 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00463 Pumo-Chr2 7641285 7645171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00463 147 444 Receptor kinase-like Gene Family AT1G53420 39.542 7.52e-69 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pumo2g00463 PK_Tyr_Ser-Thr 6.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00463 - - gmx:102670300 910.212