Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00448 ATGATCATGAAGGAGCATTCTGTTGGTACTGAACTGGCAATGAATAATGCTAGAGTGGAGGAGGGAATAGATTTCTCTTGTGACCCATACATAGGGTTAGAATTTGATACAGCAGATGAAGCACTTAAGTTTTACACTTCATATGCAAATCGAACAGGGTTTAAAGTTCGGATTGGTCAGCTTTACCGTTCAAGAACTGATGGGTCAGTTTCTTCTCGGAGATTTGTGTGCTCGAAGGAGGGACATCAACTCAGTTCAAGAACAGGCTGTCCCGCATTCATAAGGGTACAAATAAATGGTTCTGGAAAGTGGGTGGTTGATCATTTTCATAAGGACCATAACCACAATCTTGAAATCAGTGGTGAAAATTGCACTCCAACATTGCAACAGAAGGGTGCTACTGCTACAGTTATCAACTCTCTTACCGAGTTTCCTCGCAGACCAAGGAAGAAATTGCTTGAAGAAGCCAATGATGATTCCTCTTGTCCCTTTGGCATTATTGATTTCAAGCGTCTGAGAAAGGAAGTACTTGAAGGACAGTCCAGGACTGAACCATATGTGGGTCAAGAGTTCAGTTCACCTAATGAAGCCTACCAATTTTATCATGCATATGCTGCACATTTGGGTTTTGGAGTTCGAATTGGTCAACTGTTTCGTTCTAAGAATGATGGGTTGATTACATCCCGCAGATTTGTTTGCTCTAAAGAGGGGTTCCAGCACCCTTCAAGAGTTGGTTGTGGGGCTTATTTAAGGATTAAGAGACAGCCATCAGGAAAGTGGATAGTGGACCGCCTCCGAAAAGATCATAATCATGATCTAGACTCTGAAAAGGAGGGCAGGGCAAAAAGTCTTCCTGCTTCTAATATTTTGACTGAAGAGGTAGATACTGGATTGGTAAATGGTGACTTATTTAGAATAGATAACTACCCTGTCGCAAAAGTAGGTAGGCAAAATCACATTAGAAGTGAGTGGTATGGCATTCTTTTAGAGTATTTTCAATCAAGACAAGCAGAAGATACCGGATTCTTTTATGCTGTGGAAGTTGACAATGGTAATTGCATGAGCATATTTTGGGCAGATGGCAGATCTAGATATTCCTGTAGTCAGTTTGGTGATGTCCTTGTCTTAGACACATCATACCGAAAAACTGTCTATTTGGTACCATTTGCTACTTTTGTTGGAGTCAACCATCACAAGCAACCTGTGCTTCTTGGATGTGCTCTAATTGCTGATGAATCTGAAGAATCTTTCACTTGGTTGTTTCAGACATGGCTTAGGGCAATGTCTGGCCGGCTGCCTCTGACAGTTATCGCAGATCAAGACATTGCAGTCCAGAAGGCAATAGCAAAAGTCTTTCCTGTAACCCATCATCGCTTTTCTTTGTGGCAAATTAAGGCAAAGGAACAAGAGAACATGGGTCTGATGGGTAATGACTTTACAATAGATTACGAAAAGTGTGTTTACGAGAGTCAGACAGTTGATGAATTTGACGCCACATGGAATGTCCTACTCAACAAATATGGATTGAAGGACAATGCTTGGCTAAAAGAAATGTATGAGAAGCGTGCATCTTGGGTTCCATTATATTTAAAGGGCACATTTTTTGCTGGCATTCCCATGAATGAAAGCCTTGATTCATTCTTTGGTGCACTTTTAAATGCGCAAACACCTCTCATGGAGTTCATTCCTCGGTATGAAAGGGGTCTCGAGCGGCGCCGTGAAGAAGAAAGAAAAGAGGATTTTAATACTTCTAATTTTCAACCCATTTTGCAAACAAAAGAACCAGTAGAAGAACAGTGTAGAAGGCTTTACACTCTTACTGTATTCAAAGTATTTCAAAAAGAGCTATTGCAGTGCTTTAGCTATCTTGGGTTTAAAATATTTGAGGAAGGGGGCCTGAGCAGATATATGGTGCGTAGATGTGGAAATGAGATGGAAAAGCATGTAGTTACATTTAATGCATCAAATCTCAGCATTAGTTGTAGCTGTCAGATGTTTGAATATGAAGGTGTTCTTTGTAGACATGTGTTGAGGGTTTTCCAGATATTGCAATTAAGAGAAGTTCCTTCTCGCTACATCTTACACCGATGGACGAGAAATGCCGAGGATGGTGTTTTTCCTGACATGGAATCATGGAGTAGCTCTCAGGAACTAAAAAATTTGATGCTATGGAGTCTAAGAGAAACTGCATCTAAATACATAGATGCTGGTGCAACATCCATTGAAAAGTATAAACTTGCCTATGAAATTTTGCGAGAGGGTGGGAGAAAGCTTTGTTGGCACAGGTGA 2289 0.4076 MIMKEHSVGTELAMNNARVEEGIDFSCDPYIGLEFDTADEALKFYTSYANRTGFKVRIGQLYRSRTDGSVSSRRFVCSKEGHQLSSRTGCPAFIRVQINGSGKWVVDHFHKDHNHNLEISGENCTPTLQQKGATATVINSLTEFPRRPRKKLLEEANDDSSCPFGIIDFKRLRKEVLEGQSRTEPYVGQEFSSPNEAYQFYHAYAAHLGFGVRIGQLFRSKNDGLITSRRFVCSKEGFQHPSRVGCGAYLRIKRQPSGKWIVDRLRKDHNHDLDSEKEGRAKSLPASNILTEEVDTGLVNGDLFRIDNYPVAKVGRQNHIRSEWYGILLEYFQSRQAEDTGFFYAVEVDNGNCMSIFWADGRSRYSCSQFGDVLVLDTSYRKTVYLVPFATFVGVNHHKQPVLLGCALIADESEESFTWLFQTWLRAMSGRLPLTVIADQDIAVQKAIAKVFPVTHHRFSLWQIKAKEQENMGLMGNDFTIDYEKCVYESQTVDEFDATWNVLLNKYGLKDNAWLKEMYEKRASWVPLYLKGTFFAGIPMNESLDSFFGALLNAQTPLMEFIPRYERGLERRREEERKEDFNTSNFQPILQTKEPVEEQCRRLYTLTVFKVFQKELLQCFSYLGFKIFEEGGLSRYMVRRCGNEMEKHVVTFNASNLSISCSCQMFEYEGVLCRHVLRVFQILQLREVPSRYILHRWTRNAEDGVFPDMESWSSSQELKNLMLWSLRETASKYIDAGATSIEKYKLAYEILREGGRKLCWHR 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00448 762 Pfam SWIM zinc finger 655 681 IPR007527 GO:0008270
Pumo2g00448 762 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 16 122 IPR031052 GO:0006355
Pumo2g00448 762 ProSiteProfiles Zinc finger SWIM-type profile. 648 684 IPR007527 GO:0008270
Pumo2g00448 762 SMART 26again6 659 686 IPR006564 GO:0008270
Pumo2g00448 762 Pfam MULE transposase domain 373 466 IPR018289 -
Pumo2g00448 762 Pfam FAR1 DNA-binding domain 43 117 IPR004330 -
Pumo2g00448 762 Pfam FAR1 DNA-binding domain 199 273 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00448 Pumo-Chr2 7478545 7481822 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pumo2g00448 MULE 2.6e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00448 - - gmx:100816656 1483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00448 2 7478545 7481822 Pumo2g00448 2 7478545 7481822 ECH