Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00433 ATGCCCATGTCTTACTTATATGGAAAGAAATTTGTGGGTCCAGTCACACCATTAATCCTAAACTTGAGAGAAGAACTCTTTATCCAACCTTATGATAAAAACAATTGGAAGAAAGCACGTCACAAATGTGCAAAGGTAAAAGATACTGAATCTTTCACTAGCAAATGTCAGAGCAAAAATGGAGGTGTAGCTGCTTGGGAGCCAGCAAGAAGTCAAAAGTGGTTGGAAGAAGTCGTGGGAGCATTTGTGAAGAATTGCATGGTGCATTACCCACTCTATAGAAATATCTTTCCAATGTGGGCTCTGGTGACAATGGTGAGGGTTAGTGTCTTGAATGATGCTCTCAAGAGCATGTACAATGCTGAGAAGCGGGGGAAGCGCCAGGTCATGATTAGGCCATCCTCAAAAGTGATTATTAAATTCCTTTTGGTGATGCAGAAGCACGGGTACATTGGAGAGTTCGAGTACGTTGATGATCACAGAGCTGGAAAAATTGTTGTTGAATTGAATGGTAGACTGAACAAATGTGGGGTTATTAGTCCCCGTTTTGATGTCGGTGTCAAAGAGATTGAAGGTTGGACTGCTAGGCTGCTCCCCTCAAGACAGTTTGGGTATATTGTGTTGACTACCTCTGCTGGCATCATGGATCATGAAGAAGCTAGGAGAAAGAATGTTGGTGGGAAAGTGCTGGGTTTCTTTTACTAG 705 0.4255 MPMSYLYGKKFVGPVTPLILNLREELFIQPYDKNNWKKARHKCAKVKDTESFTSKCQSKNGGVAAWEPARSQKWLEEVVGAFVKNCMVHYPLYRNIFPMWALVTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00433 234 FunFam 40S ribosomal protein S15a 105 173 - -
Pumo2g00433 234 ProSitePatterns Ribosomal protein S8 signature. 204 221 IPR000630 GO:0003735|GO:0005840|GO:0006412
Pumo2g00433 234 FunFam 40S ribosomal protein S15a 174 234 - -
Pumo2g00433 234 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 1 74 IPR008930 -
Pumo2g00433 234 SUPERFAMILY Ribosomal protein S8 108 234 IPR035987 GO:0003735|GO:0005840|GO:0006412
Pumo2g00433 234 Gene3D - 76 106 - -
Pumo2g00433 234 Gene3D - 174 234 - -
Pumo2g00433 234 PANTHER 40S RIBOSOMAL PROTEIN S15A 105 233 IPR000630 GO:0003735|GO:0005840|GO:0006412
Pumo2g00433 234 Hamap 30S ribosomal protein S8 [rpsH]. 106 234 IPR000630 GO:0003735|GO:0005840|GO:0006412
Pumo2g00433 234 Gene3D - 107 173 - -
Pumo2g00433 234 Pfam Ribosomal protein S8 111 234 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00433 Pumo-Chr2 7254940 7262310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00433 105 234 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 97.692 5.33e-92 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00433 K02957 - cpap:110824281 261.536