Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00418 ATGAACATCTCAATATCAGCCTGCGCCTGCAAACAGGAGCTGCCCCTGCCCCTAGTAAGCTTCCAAAAGGGACTAACGATGGAGTCGTTGTTTCAGCATCGGAATAGCAAGGATAAGGTGGTAGTGATAATGGGGGCCACTGGTACCGGCAAGACGAAGTTGGCCATAGACGTGGCCAAACACTTCCAATCAGCGGAGATAGTGAACTCAGACAAAATGCAAGTCTACAATGGCCTAGACATCACCACCAATAAGGTGAGCCAAGAAGAGTGTGCTGGGGTCCCACATCATCTGCTTGGCACTGTTGACCCTAATATAAATTTCACCGCCAACGACTTCTGTCGCCACGCCACTATGGCTATAGATTCCATTGTCGAAAGGGATGGCTTACCCATCATCGCTGGAGGCTCCAATTCTTACTTAGACGCGTTGGTGAACCATTATGCTGAGTTTAGGTTAAGGTACCAGTGCTGTTTTCTCTGGGTCGACGTGTCACTCCCGGTTCTCCATTCTTCCCTCCAGGCACGTGTGGATCGCATGATCGAAGCCGGTCAAGTCAACGAGGTTCGTGAATTCTTCGACCCCAGTGTAACCGATTACACCAAAGGGATACGAAGGGCCATTGGGGTGCCCGAATTCGACGACTTTCTTCGCGCCGAAGCTTCTGGAACCGTTGATGACAAAACAAAACAGAGACTCCTCGAGGCTGCCATTGCCAGGTTGAAGATCAACAACTGTACGCTCGCGAACCGTCAGATTCAGAAGATTCACCGCTTGCACGGCTTGTGGAAACGGAACATGCACCGGCTCGACGCCACCGAGGTTTTCCTCGGCTCACGTGACTCCTGGCACGATCACGTGCTCGCCAAAAGCTTGATCATCCTCCACAAGTTTCTCTACGGGGAAAAGAAAACGCATGTCCCCGCCGGAATCGTGTCCCCAAAAGATGTAATTGCGGCGGCGCAGGTAGCAATGGCAGCAGCAACCCATTAG 993 0.5186 MNISISACACKQELPLPLVSFQKGLTMESLFQHRNSKDKVVVIMGATGTGKTKLAIDVAKHFQSAEIVNSDKMQVYNGLDITTNKVSQEECAGVPHHLLGTVDPNINFTANDFCRHATMAIDSIVERDGLPIIAGGSNSYLDALVNHYAEFRLRYQCCFLWVDVSLPVLHSSLQARVDRMIEAGQVNEVREFFDPSVTDYTKGIRRAIGVPEFDDFLRAEASGTVDDKTKQRLLEAAIARLKINNCTLANRQIQKIHRLHGLWKRNMHRLDATEVFLGSRDSWHDHVLAKSLIILHKFLYGEKKTHVPAGIVSPKDVIAAAQVAMAAATH 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00418 330 Gene3D - 37 299 IPR027417 -
Pumo2g00418 330 Pfam IPP transferase 153 254 - -
Pumo2g00418 330 Pfam IPP transferase 74 150 - -
Pumo2g00418 330 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 193 IPR027417 -
Pumo2g00418 330 FunFam Uncharacterized protein 166 267 - -
Pumo2g00418 330 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 37 298 IPR039657 -
Pumo2g00418 330 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 166 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00418 Pumo-Chr2 7091381 7093363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00418 154 305 C2H2 Transcription Factor Family AT2G27760 33.146 7.82e-20 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00418 K10760 - gmx:100812928 574.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00418 2 7091381 7093363 Pumo2g00418 2 7091381 7093363 ECH
Pumo4g00256 4 3738180 3739978 Pumo2g00418 2 7091381 7093363 PCT