Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00385 ATGATCTCTTCAATGAAATGCTCAGCATCATCTCTCACATGCTCCACTTTCTCAAGCAGAAAGCTTCCCTTTGCAAGGCCTCAGCTTGTCACATTACCAACCATTCAGAACGTTGAACAAAACACGGGTCCCTCTCAGTTGTGTTCCCAGAAACCGCTCTACCTTTCATCCACAGAGAACTTGGCATTGGTGAAGAGAAGGAGGGTGACGGAGTGCCAGGCCTATGAAGCTGACAGGTCACGGCCACTGGAGATTAACATTGAGCTTCCAGGTGAAGAGGCAGCTCAGAGGTTCAAGATTGGGGTGTATTTTGCTACCTGGTGGGCTTTGAATGTGGTGTTCAACATTTACAACAAGAAGGTTTTGAATGCTTTTCCTTACCCCTGGCTCACCTCCACTTTGTCCCTTGCTGCTGGCTCCCTCATGATGTTAATCTCCTGGGCCACCAGGGTTGCTGAGGTCCCAAAAGTTAACTTGGACTTCTGGAAGGCCTTGTTTCCTGTTGCAGTGGCACACACAATTGGGCATGTTGCTGCAACTGTGAGCATGTCCAAGGTTGCTGTTTCATTCACTCACATCATCAAGAGTGGAGAGCCAGCTTTCAGTGTCCTTGTGTCAAGGTTCTTGCTCGGAGAAGCATTCCCAATGCCGGTTTATCTGTCGCTGCTGCCAATTATTGGTGGTTGTGCACTAGCTGCAGTGACTGAGCTCAATTTCAATATGATTGGCTTTATGGGGGCTATGATATCAAATTTGGCATTTGTCTTCCGGAATATATTCTCAAAGAAAGGGATGAAGGGGATGTCTGTTAGTGGAATGAACTACTATGCTTGTCTTTCCATCATGTCACTGTTAATTCTCGCACCTTTTGCCATTGCTGTGGAGGGCCCCAAGGTTTGGGCTGCAGGCTGGCAAACAGCTGTGTCTCAGATTGGTCCCAATTTTGTATGGTGGGTAGCTGCCCAGAGTGTGTTCTACCACTTGTACAATCAAGTCTCATACATGTCTCTTGATCAGATTTCTCCCTTAACATTCAGCATTGGAAACACAATGAAGAGGATTTCAGTCATTGTCTCTTCCATCCTTATCTTTCACACTCCTGTTCAGCCCATTAATGCTCTTGGTGCTGCCATTGCAATTCTTGGCACCTTCCTCTATTCACAGGCTAAACAGTAA 1176 0.4668 MISSMKCSASSLTCSTFSSRKLPFARPQLVTLPTIQNVEQNTGPSQLCSQKPLYLSSTENLALVKRRRVTECQAYEADRSRPLEINIELPGEEAAQRFKIGVYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSLMMLISWATRVAEVPKVNLDFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEAFPMPVYLSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGMSVSGMNYYACLSIMSLLILAPFAIAVEGPKVWAAGWQTAVSQIGPNFVWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSILIFHTPVQPINALGAAIAILGTFLYSQAKQ 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00385 391 PANTHER SOLUTE CARRIER FAMILY 35 99 390 - -
Pumo2g00385 391 Pfam Triose-phosphate Transporter family 99 387 IPR004853 -
Pumo2g00385 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 290 388 - -
Pumo2g00385 391 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 99 390 IPR004696 GO:0016020|GO:0022857|GO:0055085
Pumo2g00385 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 141 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00385 Pumo-Chr2 6714192 6717094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00385 20 391 Antiporters AT1G61800 78.016 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00385 K15283 K05350 gmx:100804205 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00385 2 6714192 6717094 Pumo2g00385 2 6714192 6717094 ECH
Pumo4g00235 4 3485794 3489125 Pumo2g00385 2 6714192 6717094 PCT