Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00379 ATGGGTTGCTTCCCATGCTGCAAGTCAGAAGCTGAATCTTCATCCTCTACAAGAGCATCCTCCGGCAAAGTTTCCAAAGGAAGGAGAACATTCAAATCATTGGCTTCAGCTATGTCACTTCTTAAAACAGGTAGCAGCAGGCATAGACGAATAGATGCAGAGATAAGAAAATATGGATCTGCAAAAAACGATGTCAAAGTATTCACATATGCACAACTTGCTGAGGCAACAAACAACTACAATTCTGATTGCCTGGTGGGTGAAGGTGGATTCGGGAATGTTTACAAAGGATACTTAAAAAGTCTTGATCAAACTGTGGCTGTGAAGGTACTGAACAGGGGAGGAGCGCAAGGAACACGCGAATTTTTCGCAGAAATTTTGATGTTGAGCATGGTGCAACACCCAAATCTTGTGAGGCTCGTTGGTTATTGTGCAGAAGACCATCATAGGATTTTGGTTTATGAATTCATGGCCAATGGGAGTTTGGAAAATCACCTTCTAGACGTAGGTGCAGATAAGGAGCCTTTGGATTGGAAGAATAGGATGAAAATAGCCGAGGGAGCAGCCAGAGGACTTGAATATTTGCATAACAGTGCAGATCCACCTATTATATACCGTGATTTTAAATCATCTAATATACTGTTAGATGAAAATTTTAACCCAAAGCTCTCTGATTTTGGACTTGCTAAGATTGGTCCAAAAGATGGCCAGGAACATGTGTCAACAAGGGTGATGGGGACTTTTGGTTATTGTGCACCAGAGTATGCTGCTACGGGTCAGCTTAGCACAAAATCAGATATTTATAGTTTTGGGGTTGTGTTTTTGGAAATAATCACGGGTAGGAGGGTATTTGACACTGCAAGAGTTACAGAAGAGCAAAACTTGATTGACTGGGCACAACCTTTGTTTAAGGACAGAACAAAGTTCACTCTAATGGCTGACCCTTTGCTTAAAGGCCAGTTCCCTGTGAAAGGTCTATTTCAAGCCCTTGCGGTGGCAGCAATGTGTCTCCAAGAGGAAGCTGACACACGACCTTACATGGATGATGTTGTGACGGCTCTTACACATCTAGCAGTGCACAAAGTTGAAGAAAAAGACATAGCTGGTGAATCTATAAAATGTGCCGGGCATGTTGAATCTTTTAGAGCTGCAAGTTCAGCTGGATCTGGAAGGGCGTAG 1179 0.4266 MGCFPCCKSEAESSSSTRASSGKVSKGRRTFKSLASAMSLLKTGSSRHRRIDAEIRKYGSAKNDVKVFTYAQLAEATNNYNSDCLVGEGGFGNVYKGYLKSLDQTVAVKVLNRGGAQGTREFFAEILMLSMVQHPNLVRLVGYCAEDHHRILVYEFMANGSLENHLLDVGADKEPLDWKNRMKIAEGAARGLEYLHNSADPPIIYRDFKSSNILLDENFNPKLSDFGLAKIGPKDGQEHVSTRVMGTFGYCAPEYAATGQLSTKSDIYSFGVVFLEIITGRRVFDTARVTEEQNLIDWAQPLFKDRTKFTLMADPLLKGQFPVKGLFQALAVAAMCLQEEADTRPYMDDVVTALTHLAVHKVEEKDIAGESIKCAGHVESFRAASSAGSGRA 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00379 392 ProSiteProfiles Protein kinase domain profile. 80 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00379 392 Gene3D Transferase(Phosphotransferase) domain 1 157 376 - -
Pumo2g00379 392 SUPERFAMILY Protein kinase-like (PK-like) 64 355 IPR011009 -
Pumo2g00379 392 Gene3D Phosphorylase Kinase; domain 1 41 156 - -
Pumo2g00379 392 FunFam Serine/threonine-protein kinase PBS1 157 371 - -
Pumo2g00379 392 ProSitePatterns Protein kinases ATP-binding region signature. 86 109 IPR017441 GO:0005524
Pumo2g00379 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Pumo2g00379 392 FunFam Serine/threonine-protein kinase CDL1-like 51 156 - -
Pumo2g00379 392 Pfam Protein kinase domain 82 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00379 392 CDD STKc_IRAK 86 357 - -
Pumo2g00379 392 PANTHER OS07G0668900 PROTEIN 3 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00379 Pumo-Chr2 6647015 6649237 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00379 1 359 Glycoside Hydrolase AT3G07070 54.121 7.88e-139 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pumo2g00379 Pkinase 9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00379 - - gmx:100305361 690.649