Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00356 ATGGGAGCATTTGCATCCACATTGAATATGGCTGAGGCTACACAATCTAATGCTGAGTTGTTGGAGTGGCCAAAGAAAGATAAGCGCCGCTTCCTGCATGTTGTGTACCGTGTTGGTGATCTTGATCGCACCATTAAGTTTTATACTGAATGTTTCGGGATGAAGCTTTTGAGGAAAAGAGATATTCCAGAAGAGAAATATGCCAATGCTTTTCTTGGATTTGGCCCTGAACAATCCCATTTTGTTGTGGAATTAACTTATAATTATGGGGTGACCTCATATGATATTGGAACTGGCTTTGGACATTTTGCTATCGCAGCTCCAGATGTTTACAAATTGGTTGAAGACATCCGGGCTAAGGGTGGAAATGTCACCAGGGAGCCTGGTCCAGTTAAGGGTGGGAAATCTGTTATTGCCTTCGTGAAGGATCCCGATGGTTATGCTTTTGAGCTCATCCAAAGACCTTCAACCCCTGAGCCATTGTGCCAAGTAATGCTTCGCGTTGGTGATTTAGAGCGCTCAATTAAGTTTTATGAAAAGGCTTTGGGTTTGAGGGTGGTAAAGAAGGTTGATAGACCTGAATACAAGGTTGCTATTGGTACTGATGATGTATACAAGAGTGCTGAGGTTGTTAACATAGTCACACAAGAGCTTGGAGGGAAGATTACTCGGCAACCAGGACCAATTCCTGGCCTTAACACAAAGATCACTGCTTTCTTAGATCCTGATGGATGGAAAACTGTTTTGGTTGACAATCAAGATTTTCTGAAGGAACTGGAGTGA 783 0.4291 MGAFASTLNMAEATQSNAELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKYANAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAAPDVYKLVEDIRAKGGNVTREPGPVKGGKSVIAFVKDPDGYAFELIQRPSTPEPLCQVMLRVGDLERSIKFYEKALGLRVVKKVDRPEYKVAIGTDDVYKSAEVVNIVTQELGGKITRQPGPIPGLNTKITAFLDPDGWKTVLVDNQDFLKELE 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00356 260 ProSitePatterns Glyoxalase I signature 2. 97 109 IPR018146 GO:0004462|GO:0046872
Pumo2g00356 260 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 30 154 IPR037523 -
Pumo2g00356 260 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 29 190 IPR029068 -
Pumo2g00356 260 ProSitePatterns Glyoxalase I signature 1. 33 54 IPR018146 GO:0004462|GO:0046872
Pumo2g00356 260 Gene3D - 156 198 IPR029068 -
Pumo2g00356 260 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 195 IPR004360 -
Pumo2g00356 260 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 31 151 IPR004360 -
Pumo2g00356 260 FunFam Lactoylglutathione lyase 27 156 - -
Pumo2g00356 260 PANTHER LACTOYLGLUTATHIONE LYASE 11 197 - -
Pumo2g00356 260 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 161 254 IPR029068 -
Pumo2g00356 260 CDD GlxI_Ni 32 152 - -
Pumo2g00356 260 Gene3D - 3 155 IPR029068 -
Pumo2g00356 260 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 160 260 IPR037523 -
Pumo2g00356 260 NCBIfam lactoylglutathione lyase 31 155 IPR004361 GO:0004462|GO:0046872
Pumo2g00356 260 Gene3D - 199 260 IPR029068 -
Pumo2g00356 260 ProSitePatterns Glyoxalase I signature 1. 163 184 IPR018146 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00356 Pumo-Chr2 6116745 6120520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00356 33 152 Calmodulin-binding Proteins AT1G08110 30.345 2.76e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00356 K01759 - gmx:100799447 489.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00356 2 6116745 6120520 Pumo2g00356 2 6116745 6120520 ECH
Pumo2g00356 2 6116745 6120520 Pumo4g00195 4 2352702 2356348 ECH
Pumo4g00195 4 2352702 2356348 Pumo2g00356 2 6116745 6120520 PCT