Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00351 ATGAAGGGTGAAGCAGCTGAGACTCTGAGTTATTCTCTTAAACGCTCCCCACCTTCAACCATGTCTTCTTCTTCCTCTTCTCTTATCACCACTGTTGTTGATAATAATACTAATAACCCTTCTCACCCTTCTGAGTTAAGAGCCACACGCCGTCGTTTTGGTTCTCACCACCTTCATGAGATAAGCCTCAAAACGCCTATGGTTAGGCCTTATGTTCGATCAAAAATGCCCAGGCTTCGTTGGACACCAGATCTCCATCGTTGCTTCGTGCATGCAGTTCAAAGACTTGGAGGAGAAGACAGGGCCACACCAAAGATGGTTTTACAGCTCATGAATGTAAAGGGGCTTACTATATCTCATGTCAAAAGCCACCTTCAGATGTACAGGAGCATGAGGCACGAGCAGATGAGTCAAGGTGCAAAGAAGAATGATATGGCTCCGGATTTCCTTGCTTCCACACTCTCAGCTCTTGGCCCAAGGTACGGCCAACAGAATCCTAACCCAAGAAGCTGCACTGAAGAGCTTGTTCCCACCCAAGCTCAATGGAATCATGATGAGCAAGAGTGTTACAATGGAAAGCAAGGTGGTGAATCGATTATAATTTGTAACGGCAATGAACAGAAGGTGCACTCCTACATCATCTTCGAGGGTGTTCTGAGAGGCCAGACTGTCCAAGAGAATAAAACTACTACTCCTGAAAAGGTGTCACTAGGTGATGCCGGTTTTGAAAGCGACCATCAAAGATTCCAAGACAGAACTACTAATACTGCCATAGGAGAGAGAGTACTGTCCCTGTCAATGAGCTCAAGGCCTTCACATTCATTCTTGAATAATCGGAGCCACACTGGTCCAGATGCGAATGATGTCTCTCTTCAGCTCACGCTCTCTTAG 891 0.4602 MKGEAAETLSYSLKRSPPSTMSSSSSSLITTVVDNNTNNPSHPSELRATRRRFGSHHLHEISLKTPMVRPYVRSKMPRLRWTPDLHRCFVHAVQRLGGEDRATPKMVLQLMNVKGLTISHVKSHLQMYRSMRHEQMSQGAKKNDMAPDFLASTLSALGPRYGQQNPNPRSCTEELVPTQAQWNHDEQECYNGKQGGESIIICNGNEQKVHSYIIFEGVLRGQTVQENKTTTPEKVSLGDAGFESDHQRFQDRTTNTAIGERVLSLSMSSRPSHSFLNNRSHTGPDANDVSLQLTLS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00351 296 NCBIfam myb-like DNA-binding domain, SHAQKYF class 77 130 IPR006447 GO:0003677
Pumo2g00351 296 FunFam Myb family transcription factor 75 133 - -
Pumo2g00351 296 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 44 175 IPR046955 GO:0003700
Pumo2g00351 296 SUPERFAMILY Homeodomain-like 75 131 IPR009057 -
Pumo2g00351 296 MobiDBLite consensus disorder prediction 1 27 - -
Pumo2g00351 296 MobiDBLite consensus disorder prediction 269 296 - -
Pumo2g00351 296 Gene3D - 76 134 - -
Pumo2g00351 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 133 IPR017930 -
Pumo2g00351 296 Pfam Myb-like DNA-binding domain 79 129 IPR001005 -
Pumo2g00351 296 MobiDBLite consensus disorder prediction 12 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00351 Pumo-Chr2 6061882 6065379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00351 68 138 G2-like Transcription Factor Family AT2G42660 73.239 7.94e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pumo2g00351 Myb_DNA-binding 9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00351 - - gmx:100798980 447.973