Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00343 ATGGAGTGGACTAGAGGCCACACCCTCGGCCGGGGCTCCACCGCCGCCGTCTACATCGCCGAGTCCCGCTGGTCCGGTCAAGTGTTCGCCGTGAAGTCGGCGGAGCTCCACCGGTCGGAATTCCTCAAAAGGGAGCAGAGGATTCTTTCTAAACTGAAATGTCCTCAAATTGTGGCCTACCAAGGTTGTGACATCACGTTCGAGAACGGTGTGCACTGGTTCAACATGTTCATGGAGTACGCGCCTCACGGGACGCTGGCGGAGCACGGTGGCGGCATGGAAGAAGCGGTGGTGGGATCCTACACGCGCCAAATTCTGCAGGGGCTGAACTACCTCCACTCCAATGGGATAGTGCATTGCGACGTGAAGGGGCAGAACGTGTTGGTGACAGAGCAAGGGGTGAAAATTGGGGACTTGGGTTGCGCCCGGAGTGTGGGGGAGTCGTCATCGGTGATCGCCGGCACGCCGGCGTTCATGGCGCCGGAGGTGGCGCGTGGGGAACAGCAGGGGTTCCCTGCTGACGTGTGGGCACTTGGGTGCACGGTGCTGGAGATGATCACCGGGAAGCCGCCTTGGCACGGCGGCGGCGGTGACCCGGCAGCGGTGGTTTATAGGATCGGGTTCTCCGGCGAGGTGCCGGAGATTCCTAGCTTTGTGTCGGAGCAGGGGAGGGACTTTTTGGGTAAGTGTTTGAAGAGAGACCCCAATGAGAGGTGGTCGGTGGAGGAGCTTCTCGGACACGGTTTTGTTAAGGAGTGCACGGAATTGAAGTTGTTAACGTTGGATTCGGACACTCCCACTTGTGTGTTGGAACGAGGTTTTTGGGATTCACTGGAGACGGCTCAGCATGGAGCACGTGATTGTCCCTCTCCTAGGGACAGAATTCGTAGGTTGTTTTCGGATGAGCCCGTTTGGGAATGGGACGATGATGAGCAATGGGTCACGGTGAGAAGCAATGAGGTCCATGACAAGCACTTGGAGTTGGAGGGGTTGTCCCTTCACCAAATGGACACTACTTTTTGTAATGTCGTTAGTGATGAAGAGAACGGTTTGGTAACTTTTTGTGAACCTAAAATTGCAGTATCAACTTTAGTTGAATTGAGTAGATGGAATGTTGCTGTTAGTGATAATGATTGTTATCTTAGAGGCAGAAGCTGTGATTGTCGCAGCAGAGTATCATTAATGTTGTCAGCTTGTGCCATCCAAGGCATAAGCCACCGGATCATGCACCACTCCACAGAGTTCAGGGTGTACTTCAATGATCTTCCAACACACGACTTCAATTCAATCTTGAAGGCCCTCCCAGAGTTCCACAAGTTGCTTAGGCAAGACAGGAAAAATGGGTTCCCTTCCATTTTCATGGGAGGCTACCTTGGCTCATTTTATGGAAGACTATTCTATTCTTATTTTCACTCATTAACACGTGTAACCCTCAAGAGGGATGGTGTAGTCATAGATTTGGTTCCCCCTCCAACCAAGGGGGAAATAGAACAAGAGAAGTTTGATTCATATGATGTACATTTCTATGCAGCATCAAGGGAAGAGATAGAAGAAGAGGTGAGGAAAGAAGGGTCATTCAAGTTGGAGAGGCTAGAGATGTTTGAGATGGACAAGAGTCATGAGCAAGGAAGTGGGAGCTATGGCACACAGGTTGCTGTGGCAGTTAGGACCATTGAAGAATCCATGATCTCACACCACTTTGGAGAAGGGATCTCGGACAGTTTGTTTGAGAATTATGTAAGACTGGTAGATGAAGAAGTGGCTAAGGAGGATATTAGACCAATCTCTTTTGTTCTGGTTCTCAGAAAAATGTGA 1815 0.5096 MEWTRGHTLGRGSTAAVYIAESRWSGQVFAVKSAELHRSEFLKREQRILSKLKCPQIVAYQGCDITFENGVHWFNMFMEYAPHGTLAEHGGGMEEAVVGSYTRQILQGLNYLHSNGIVHCDVKGQNVLVTEQGVKIGDLGCARSVGESSSVIAGTPAFMAPEVARGEQQGFPADVWALGCTVLEMITGKPPWHGGGGDPAAVVYRIGFSGEVPEIPSFVSEQGRDFLGKCLKRDPNERWSVEELLGHGFVKECTELKLLTLDSDTPTCVLERGFWDSLETAQHGARDCPSPRDRIRRLFSDEPVWEWDDDEQWVTVRSNEVHDKHLELEGLSLHQMDTTFCNVVSDEENGLVTFCEPKIAVSTLVELSRWNVAVSDNDCYLRGRSCDCRSRVSLMLSACAIQGISHRIMHHSTEFRVYFNDLPTHDFNSILKALPEFHKLLRQDRKNGFPSIFMGGYLGSFYGRLFYSYFHSLTRVTLKRDGVVIDLVPPPTKGEIEQEKFDSYDVHFYAASREEIEEEVRKEGSFKLERLEMFEMDKSHEQGSGSYGTQVAVAVRTIEESMISHHFGEGISDSLFENYVRLVDEEVAKEDIRPISFVLVLRKM 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00343 604 Pfam SAM dependent carboxyl methyltransferase 406 467 IPR005299 GO:0008168
Pumo2g00343 604 Pfam SAM dependent carboxyl methyltransferase 493 603 IPR005299 GO:0008168
Pumo2g00343 604 Gene3D Transferase(Phosphotransferase) domain 1 2 284 - -
Pumo2g00343 604 Gene3D Vaccinia Virus protein VP39 507 537 IPR029063 -
Pumo2g00343 604 Gene3D Vaccinia Virus protein VP39 390 480 IPR029063 -
Pumo2g00343 604 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Pumo2g00343 604 ProSiteProfiles Protein kinase domain profile. 3 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00343 604 SUPERFAMILY Protein kinase-like (PK-like) 3 259 IPR011009 -
Pumo2g00343 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Pumo2g00343 604 Gene3D - 492 590 IPR042086 -
Pumo2g00343 604 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 395 603 IPR029063 -
Pumo2g00343 604 SMART serkin_6 3 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00343 604 CDD STKc_MAPKKK 2 250 - -
Pumo2g00343 604 Pfam Protein kinase domain 5 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00343 604 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00343 Pumo-Chr2 5988630 5993930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00343 1 278 MAP Kinase Kinase Kinase AT2G32510 52.069 1.11e-99 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pumo2g00343 Pkinase 1.3e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00343 K20716 - gmx:100802174 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03671 4 76253941 76255234 Pumo2g00343 2 5988630 5993930 ECH
Pumo11g01223 11 41627729 41629012 Pumo2g00343 2 5988630 5993930 ECH
Pumo2g00343 2 5988630 5993930 Pumo2g00343 2 5988630 5993930 ECH
Pumo2g00343 2 5988630 5993930 Pumo4g00180 4 2197422 2199071 ECH