Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00326 ATGGCTCGTCCTCGTTTCCCTGTTTCACTCCTTCTCTCTTTGCTCTTCGTTGCTCTTCCTCTTTCCCTTGCCACCACTGACCCTTCTGATGTTCAAGCTCTTGAGGTCATGTACAATGCGTTGAGTAGTCCAACTCAGCTAACGGGTTGGAAAATCGGTGGTGGTGATCCTTGTGGAGAGTCATGGAAAGGGGTAACGTGTGAGGGATCAGCCGTTGTTTCCATTGAGCTCTCAGGTTTAGGACTCGATGGGACTCTGGGGTACCTGCTTTCGGATCTTATGTCACTCAGAAAGCTTGACTTAAGTGACAACAAGATCCATGATACAATTCCCTACCAGTTGCCGCCGAATCTTACAAGCCTGAATTTTGCAAAAAATAATTTATCTGGAAATCTTCCTTATTCCATTTCTGCCATGGCTTCACTCAATTATTTAAATTTAAGCAATAATGCGCTCTCCATGACAGTTGGTGATATTTTTGCAAGTCTTCAAGATCTTGGTACCCTGGATCTATCATTCAATAACTTCTCTGGGGATCTTCCTCCTTCACTTGGTGCATTGGCCAATCTTTCTTCTCTTTTCTTGCAGAAGAACCAGTTGACTGGCTCTCTTACTGTTCTTGTTGGTTTGCCTTTGGATACTTTAAATGTTGCAAACAATAATTTCAGTGGATGGATACCTCATGAGCTTAGTTCCATCCATAATTTCATATATGATGGAAATTCTTTTGAGAACACTCCTGCTCCTCTTCCGCCAGCATCTACTTTACCTCCTCCCAGTGGATCTCATAGTCATCATCATTCTGGATCTGGTTCACATAATAAAACACATGCTTCTGATAATGAAATTTCTGATGGCCATAAGGGTTTGACAGTGGGGGCTGTTGTAGGCATTGTTTTAGGCTCAGTACTGGGGGCTGCTATTGTGCTGCTTGCTCTTGTTTTCTGTATCCAAAAGCAAAAGGGGAAGAAAAAGGGTACAAGGAATTTCAGTGGGAGCCTTCCTCGTGGAGTTATTAATGTAACTCCTCAGATGCAAGAGCAGAGGGTAAAAAGTGCTGCTGTTGTTACAGATCTCAAGCCTCGTCCAGCAGAAAATGTGGCAGTTGAGAGGGTAGCTGTAAAAAGTGGATCTGTAAAGCAGTTGAAGTCCCCTATAACTTCCACATCATACACAGTTGCTTCTCTCCAAAGTGCAACAAATAGCTTTAGTCAAGAATTTATTATTGGTGAAGGTTCTCTCGGCCGAGTTTACAAGGCTGATTTCCCAAATGGGAAGGTAATGGCTATTAAGAAGATCGACAACTCAGCATTGTCATTACAGGAGGAAGACAATTTTCTTGAAGCTGTTTCAAATATGTCACGCTTGCGGCACCCAAACATTGTGACATTGGCTGGATATTGTGCAGAGCATGGCCAACGACTTCTAGTTTATGAGTATATAGCAAATGGAAATCTGCATGACATGCTCCATTTTGCTGAAGATAGCAGCAAGGCTTTGTCTTGGAATGCCCGTGTACGCATAGCACTTGGCACAGCCCGGGCTTTAGAGTACTTGCATGAAGTGTGCTTGCCTTCTGTTGTACATAGAAATTTCAAATCTGCAAATATATTACTTGATGAGGAGCTCAATCCTCACCTGTCTGACTGTGGTTTAGCTGCTTTGACACCAAACACTGAGCGACAGGTATCAACTCAGATGGTTGGTTCATTTGGTTATAGTGCTCCTGAGTTTGCATTATCAGGAGTATACACTGTAAAAAGTGATGTTTACAGCTTTGGGGTAGTTATGCTGGAACTATTGACTGGTCGGAAGCCACTTGACAGTTCACGGGTTCGATCAGAGCAGTCACTTGTGAGGTGGGCTACACCCCAACTCCATGATATAGATGCCTTGGCCAAAATGGTTGATCCTACTTTGAACGGCATGTATCCTGCAAAGTCACTGTCACGCTTTGCTGATATCATTGCCCTCTGTGTTCAGCCGGAACCTGAATTTCGACCTCCAATGTCTGAGGTGGTGCAAGCATTGGTTCGGTTAGTGCAAAGAGCAAGTGTGGTTAAAAGACGACCCAGCGAGGAATCTGGTTTTGGTCACAGGACCCCAGAACATGAGGCCATAGACATGTCATTTTAA 2136 0.4382 MARPRFPVSLLLSLLFVALPLSLATTDPSDVQALEVMYNALSSPTQLTGWKIGGGDPCGESWKGVTCEGSAVVSIELSGLGLDGTLGYLLSDLMSLRKLDLSDNKIHDTIPYQLPPNLTSLNFAKNNLSGNLPYSISAMASLNYLNLSNNALSMTVGDIFASLQDLGTLDLSFNNFSGDLPPSLGALANLSSLFLQKNQLTGSLTVLVGLPLDTLNVANNNFSGWIPHELSSIHNFIYDGNSFENTPAPLPPASTLPPPSGSHSHHHSGSGSHNKTHASDNEISDGHKGLTVGAVVGIVLGSVLGAAIVLLALVFCIQKQKGKKKGTRNFSGSLPRGVINVTPQMQEQRVKSAAVVTDLKPRPAENVAVERVAVKSGSVKQLKSPITSTSYTVASLQSATNSFSQEFIIGEGSLGRVYKADFPNGKVMAIKKIDNSALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYIANGNLHDMLHFAEDSSKALSWNARVRIALGTARALEYLHEVCLPSVVHRNFKSANILLDEELNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGVYTVKSDVYSFGVVMLELLTGRKPLDSSRVRSEQSLVRWATPQLHDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRPSEESGFGHRTPEHEAIDMSF 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00326 711 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 481 691 - -
Pumo2g00326 711 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 368 480 - -
Pumo2g00326 711 Gene3D Phosphorylase Kinase; domain 1 364 480 - -
Pumo2g00326 711 MobiDBLite consensus disorder prediction 247 284 - -
Pumo2g00326 711 Pfam Leucine rich repeat 95 152 IPR001611 GO:0005515
Pumo2g00326 711 Pfam Protein kinase domain 406 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00326 711 ProSiteProfiles Leucine-rich repeat profile. 95 116 IPR001611 GO:0005515
Pumo2g00326 711 SMART LRR_typ_2 93 121 IPR003591 -
Pumo2g00326 711 SMART LRR_typ_2 163 187 IPR003591 -
Pumo2g00326 711 SMART LRR_typ_2 139 162 IPR003591 -
Pumo2g00326 711 ProSiteProfiles Protein kinase domain profile. 403 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00326 711 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Pumo2g00326 711 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 27 254 - -
Pumo2g00326 711 Gene3D Transferase(Phosphotransferase) domain 1 481 690 - -
Pumo2g00326 711 CDD STKc_IRAK 409 680 - -
Pumo2g00326 711 SUPERFAMILY L domain-like 26 235 - -
Pumo2g00326 711 Gene3D Ribonuclease Inhibitor 27 285 IPR032675 -
Pumo2g00326 711 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 682 IPR046959 -
Pumo2g00326 711 SUPERFAMILY Protein kinase-like (PK-like) 382 677 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00326 Pumo-Chr2 5846042 5853296 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00326 139 711 Strubbelig Receptor Gene Family AT4G22130 71.231 0.0 817
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pumo2g00326 Pkinase 3.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00326 - - gmx:100781455 1258.05