Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00304 ATGGCAGGGTCATGTTTCCACGGTCTTAGGCTAATGATGTCTAAGAGTAAATCTTTACCGGACCCTTCATCTTCTTCCAAGACCCAGTTGGAGAGTGACGCGGAGAATGTGGAAAGGAAGAGGTTTGATAGCATGGAATCGTGGTCCATGATATTGGACTCAATGGACACATGGGAAACTTCAAAGGAGGAGGGGGAGCAAGAGGCATGGACTGCAGACCTGTCACAGCTTTTTATAGGTAACAAGTTTGCTTCTGGGGCTCACAGTCGAATTTACCGTGGAATCTACAAGCAGAGAGCCGTTGCTGTGAAAATGGTGAAGATTCCATCCCAGGATGAGGAGAAAAAGGCCTTACTAGAGGAGCAATTTAACTTTGAAGTGGCTTTGCTTTCACGTCTCATTCATCATAACATAGTGCAGTTTATTGCAGCATGTAAAAAACCGCCTGTGTTCTGTATCATAACAGAATACATGTCACAAGGGACACTGAGGATGTATCTGAACAAGAAAGAGCCGTACTCACTCTCAATAGAAACAATACTAAGGTTAGCTCTAGATATATCAAGGGGCATGGAATACCTTCATTCACAAGGTGTGATTCACAGAGACCTCAAGTCAAGTAATTTGCTTCTCGATGATGACATGAGGGTTAAGGTGGCGGATTTTGGCACATCTTGTCTTGAAACACGATGCCGGAAAAGCAAAGGGAATTCAGGAACATATCGTTGGATGGCACCAGAGATGGTTAAGGAAAAACCTTATACTCGTAAAGTTGATGTGTACAGTTTTGGTATTGTGCTTTGGGAGCTCACAACTGCATTAGTTCCCTTCCAAGGAATGACACCAGTGCAAGCTGCTTTTGCTGTGGCTGAGAAGAATGAAAGGCCTCCTCTGCCAGCTAGTTGTCAACCAGCACTAGCACATCTGATAAAGCGTTGCTGGTCAGCAAACCCTTCAAAACGGCCAGATTTCAGTGATATTGTGTCTATTTTGGAGAAGTACGATGAGTGTGTGAGGGAGGGCCTACCACTGAGTCATCATCATTCAGGGCTAGTCAGCAGAAATGTAATTATTGAACGCCTAAAAGGCTGTGTATCAATGAGCTCTTCCATACCTGTACATGCTTGA 1128 0.4433 MAGSCFHGLRLMMSKSKSLPDPSSSSKTQLESDAENVERKRFDSMESWSMILDSMDTWETSKEEGEQEAWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVKIPSQDEEKKALLEEQFNFEVALLSRLIHHNIVQFIAACKKPPVFCIITEYMSQGTLRMYLNKKEPYSLSIETILRLALDISRGMEYLHSQGVIHRDLKSSNLLLDDDMRVKVADFGTSCLETRCRKSKGNSGTYRWMAPEMVKEKPYTRKVDVYSFGIVLWELTTALVPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWSANPSKRPDFSDIVSILEKYDECVREGLPLSHHHSGLVSRNVIIERLKGCVSMSSSIPVHA 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00304 375 FunFam Serine/threonine-protein kinase isoform 1 67 159 - -
Pumo2g00304 375 MobiDBLite consensus disorder prediction 17 31 - -
Pumo2g00304 375 Gene3D Phosphorylase Kinase; domain 1 66 159 - -
Pumo2g00304 375 CDD STKc_MAP3K-like 84 331 - -
Pumo2g00304 375 MobiDBLite consensus disorder prediction 15 39 - -
Pumo2g00304 375 Pfam Protein tyrosine and serine/threonine kinase 79 331 IPR001245 GO:0004672|GO:0006468
Pumo2g00304 375 Gene3D Transferase(Phosphotransferase) domain 1 160 349 - -
Pumo2g00304 375 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 70 334 - -
Pumo2g00304 375 PRINTS Tyrosine kinase catalytic domain signature 258 280 IPR001245 GO:0004672|GO:0006468
Pumo2g00304 375 PRINTS Tyrosine kinase catalytic domain signature 155 168 IPR001245 GO:0004672|GO:0006468
Pumo2g00304 375 PRINTS Tyrosine kinase catalytic domain signature 239 249 IPR001245 GO:0004672|GO:0006468
Pumo2g00304 375 PRINTS Tyrosine kinase catalytic domain signature 302 324 IPR001245 GO:0004672|GO:0006468
Pumo2g00304 375 PRINTS Tyrosine kinase catalytic domain signature 193 211 IPR001245 GO:0004672|GO:0006468
Pumo2g00304 375 SMART serkin_6 77 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00304 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Pumo2g00304 375 SUPERFAMILY Protein kinase-like (PK-like) 55 331 IPR011009 -
Pumo2g00304 375 FunFam serine/threonine-protein kinase HT1 160 352 - -
Pumo2g00304 375 ProSiteProfiles Protein kinase domain profile. 77 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00304 Pumo-Chr2 5594974 5600167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00304 1 375 MAP Kinase Kinase Kinase AT1G62400 76.786 0.0 609
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pumo2g00304 PK_Tyr_Ser-Thr 6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00304 - - gmx:100810171 700.664