Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00268 ATGCAAACGTCTCAGAAACACCCAACCTCAGCTGGTATCCATTTATACCACCAGCCTGCACAAGACATTGATCCCTACACTCATTACCAAATATTACAAAGCAATTCATGCAATGAAATCCATGACAGCAGCAGCCAGGGAACCACTATTTCTTTTGAAACCTGCAAGGAACAATACTTTACCCTTGAATCATCCCCAGCAATCAATGATCTCATAGGTTGTGATTCTCCTTCCTATGCTAGTGTATCATCCAATAGGAGTCCTTTTTCTCCACAAGCTTCTCATTCATACCATTCAGACCAGCATCAGTCATCAGACAACACCTATGGATCACCAACAAGTGCACACTCTAGTGCTGATGATAGCTACGAATTGAAGCACAAGCTTAGAGAACTTGAGATTTCATTGTTGGGGCCTGATTCAGATATTGTTGACAGTTCTCACTGCTGCTACAAGGGTGGCCACCACGGAGCATCTCCAATGGCTAAATACAATTGGGATCAGATTGTAGAAATGATTCCAAAATTAGACTTGAAAGAAGTCCTCATTCGGTGTGCACAAGCTGTGGCTGATGATGATATTGAAACAGCAGTGGGATTTATGAATAATGTATTGGCAAAGATGGTATCAGTTGGGGGTGATCCAATTCAGAGGTTAGGTGCTTACATGTTGGAGGGTCTAAGAGCAAGGTTGGAGTCTTCAGGGAGCATAATCTACAAAGCCTTGAAATGTGAACAACCAGCAAGCAAAGATCTCATGGCTTACATGCACATCCTGTACCAGATTTGCCCATATTGGAACTTTGCTTACACATCTGCAAATGCTGTCATTGGAGAAGCAATGCTAAATGAATCAAGAATTCACATAATTGACTTCCAAATTGCACAGGGCACTCAGTGGTTGTTGCTTATTCAGGCTCTTGCATCTCGTCCTGGTGGAGCGCCTTTCATTCGTGTAACCGGTGTTGATGATTCCCAATCATTTTATGCTAGGGGTGGAGGACTTCACATTGTAGGACAACGCCTCACAGATTATGCCAAATCTTGTGGAGTGCCATTTGAGTTTCACAGTGCTGCAATGTCTGGAAGTGAGGTTGAACTAGGAAACCTTGTGGTTCAACCCAGGGAAGCTCTAGCTGTGAATTTCCCTTTTGTTTTGCACCACATGCCAGATGAGAGTATGAGCACAGAGAACCATAGGGACAGGCTATTGAGACTGGTGAAGAGTTTGTCACCCAAGGTTGTGACCCTTGTTGAGCAAGAATCCAACACCAACACTTCTCCCTTTTTCCAAAGGTTTGTTGAGACCTTGAGTTACTACACTGCTATGTTTGAGTCCATAGATGTGGCCCGCCCCAGAGATGATAAGCAAAGGATCAATGCAGAACAACACTGTGTGGCTCGTGACATTGTCAACATGATAGCATGTGAGGGGAATGAGAGGGTGGAAAGGCATGAACTCTTGGGGAAGTGGAGGTCAAGATTTTCAATGGCTGGTTTTGCACCATGCCCTTTGAGTTCCTCAGTCACAGCTGCAGTTAGAAATATGTTAAATGAATTCAATGAAAATTATAGGCTTGAACATAGAGATGGTGCTCTCTATCTAGGATGGAAGAATAGAGCTATGTGTACCTCTTCTGCTTGGAGATGTTACTGA 1656 0.436 MQTSQKHPTSAGIHLYHQPAQDIDPYTHYQILQSNSCNEIHDSSSQGTTISFETCKEQYFTLESSPAINDLIGCDSPSYASVSSNRSPFSPQASHSYHSDQHQSSDNTYGSPTSAHSSADDSYELKHKLRELEISLLGPDSDIVDSSHCCYKGGHHGASPMAKYNWDQIVEMIPKLDLKEVLIRCAQAVADDDIETAVGFMNNVLAKMVSVGGDPIQRLGAYMLEGLRARLESSGSIIYKALKCEQPASKDLMAYMHILYQICPYWNFAYTSANAVIGEAMLNESRIHIIDFQIAQGTQWLLLIQALASRPGGAPFIRVTGVDDSQSFYARGGGLHIVGQRLTDYAKSCGVPFEFHSAAMSGSEVELGNLVVQPREALAVNFPFVLHHMPDESMSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFQRFVETLSYYTAMFESIDVARPRDDKQRINAEQHCVARDIVNMIACEGNERVERHELLGKWRSRFSMAGFAPCPLSSSVTAAVRNMLNEFNENYRLEHRDGALYLGWKNRAMCTSSAWRCY 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00268 551 ProSiteProfiles GRAS family profile. 169 549 IPR005202 -
Pumo2g00268 551 MobiDBLite consensus disorder prediction 83 122 - -
Pumo2g00268 551 Pfam GRAS domain family 178 549 IPR005202 -
Pumo2g00268 551 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 111 542 IPR005202 -
Pumo2g00268 551 MobiDBLite consensus disorder prediction 83 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00268 Pumo-Chr2 5180181 5184193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00268 1 549 GRAS Transcription Factor Family AT4G17230 59.601 0.0 643
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo2g00268 GRAS 1.7e-126 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00268 - - gmx:100819190 1043.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00268 2 5180181 5184193 Pumo2g00268 2 5180181 5184193 ECH
Pumo4g00111 4 1464776 1468422 Pumo2g00268 2 5180181 5184193 PCT