Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00261 ATGCTCTTTAACATTTGTGTCTTTTTTTCCTCCTCCTTCCCCGAGCATTGTTTGACTTCACTTCCGCTTCTTCGGACCCCACTCTCTCTCTCTCTCTTTTCAATTCCCGGTTTTGTTGTTGTTGAAGAATGGTTTGAGTTAGGGGGGCGGTGTGGTGTGTTAGGGTTTTTCCTAGTCCAATTTGCGTTGGCCTTGGAACGACCCGTCGTAGGTTTAAGAATGTCTGGTGCGGAGGTTGGTGGTGGCGGTGTCTTTGTGACGTGGGAGGAGCAGGTGATATGTCAGGAGCGTGGGAATCGAGTGATTCACTTCTACCTAAAGGATGCAATGGGGAATTCGGTGCTTGCTGTGGTGGGGACTGAGAGGAGTGTGAGGCACATGATGTATGTTGTCCCTGACAATTTCTTGCAGGCTTATGGATCCACACAGCCCATCAATGCTTGCAAATGGAGGGCAAGGAGAGAGGTTGTTGACTGGCTCACTTGTTTGGTTTCGCGCAATTGGTCACACCATGCAGGTGTACAGCTGGATGATTCAGTACAAGCCGATGAATCTCTCAAGATTTTAACGCCTAGGATCAATGTCAATAATAAAATTTTACCTGATAAAATGATTACTAGGAAACTAAAATTCCAAAGTTCAGATATCGAATGGTCAGGCTTTACTTGGTTTTGTGCTAAACAGCTGAAGCACTACTCAGGGTTTTGCAGGAATGGAACAACCATAAATGTTCATTCATTTGTATATATTATGGCTGAAGAAGAAAACCACTATCTTGGTTACTTGGAAGATATGTATGAAGACAAGAAGAGACAAAAAAAGGTGAAGGTACGGTGGTTTCACCATGGTCAGGAAGTTAAGCATGTGATTCCACAGCTGAATCTGCAAGAGGGAGAGGTTTTCATCACACCTCATGTTCAGGTGATCAGTGCTGAGTGTGTCAATGGTCCTGCAACAGTTTTGACTCCTAAGCATTATGAGAAATACCTGGCTGCTGTGCCTCATACCTCTTTATCTGAGATCCATATGTGCTTTAGGCAGTTTAAAAACAATAAGCTTAAGCCCTTCACACTTACAAAGTTGCGTGGATATAGTAACCAATCTGTACTTTCTTGTTTGAATAGTCCTACTCCCTCCAAGAGAAAGGCAAAGTTTGAAAAATCGCACACAGATGATGATGAGAACTTCACTCAAGATGATCCTTCAAGGTTCAGCAATAAGAGAAATAGAAGTTCTAAGGATCATGTACTTGAAAAGGGTTCTTCTGGTCTGCAAGTCTCTGTTCCTACGAATGAAATGACAAAATGTGAACCAAAATACCCTAGTTTAAAATTAAAACTATCAAGAAAAACAATGGGTATTAAGGTTATTGGACCAAAGCCTCAAGTGTCTTTTCAGGTCGGTGCAAAGATAGAGGTTCTCTGTCAAGATAGTGGCATTAGAGGATGCTGGTTTAGATGTAAAATCTTGAGTATGTCTCTGAGGCTGCTGAAGGTCCAATATGATGATTTGCTGGATATAGACGGACCACAGAAACTAGAGGAATGGGTCCCTGCATCTAGAGTGGCAGCTCCTGACAAATTGGGTATGCGATGTTCAGGCCGCTTAACAGTACGGCCATGCCCTCCTGAATATAATACAGGTCATATTTTTGAGATTGGAGCACCAGTGGATGCCTGGTGGTGTGATGGATGGTGGGAAGGTGTCATAACTGCAGTTAATGTCAATGGAGATGGAATCCTGCAGGTTTATACCCCTGGTGAAGAGAGGTTCCTAAAGGTCGAGAAGAAGAACATTCGGATTTCCCGAGATTGGATCAATAACAGGTGGGTTGATGTACAGGGAAAGCCCGACATTTGCAGCTATTTATCTTCAAATGTCAGGTCAAGCATCAGGATGTCAGCTAATTCTGCAGTGGTAGATGGATCTATGTCCGATTTCTCTGCAATGTTAGAAAGTAAACCATCACCAATTGCCAAATTTGAAGTTGCTAAGAAGGTTGAGCCTGAAAAACCATCACCAACTGCCAAAGTTGAAGTTGCTAAGAAGGTTGAGCCTGAATTATCTTGTTTGGAAGCACCTGGTGACCTGGAAAATATGAAGGGAATAACTTTGAGGGAGCCACTCTATGCCATTCATGAAGACAAGGATAACAACTCTGGTGGTGGCTGTGATGATGAAGCTGACAAGGCTGTGAAGACACTTCTTGCCTTAAATGAACACAAGGATAAGAACTCAGGTGGAGGCAGTGATTGTGACACTGACAACGATGATGATGTTGATGATGATGATGTTGACGATGATGAAGAGGATAGTGAGGAAGATTTTGATTGTTCTGAACCAAAACTTGGTGCAGCAGAAGCAATTCGAGTTGCATGA 2379 0.4304 MLFNICVFFSSSFPEHCLTSLPLLRTPLSLSLFSIPGFVVVEEWFELGGRCGVLGFFLVQFALALERPVVGLRMSGAEVGGGGVFVTWEEQVICQERGNRVIHFYLKDAMGNSVLAVVGTERSVRHMMYVVPDNFLQAYGSTQPINACKWRARREVVDWLTCLVSRNWSHHAGVQLDDSVQADESLKILTPRINVNNKILPDKMITRKLKFQSSDIEWSGFTWFCAKQLKHYSGFCRNGTTINVHSFVYIMAEEENHYLGYLEDMYEDKKRQKKVKVRWFHHGQEVKHVIPQLNLQEGEVFITPHVQVISAECVNGPATVLTPKHYEKYLAAVPHTSLSEIHMCFRQFKNNKLKPFTLTKLRGYSNQSVLSCLNSPTPSKRKAKFEKSHTDDDENFTQDDPSRFSNKRNRSSKDHVLEKGSSGLQVSVPTNEMTKCEPKYPSLKLKLSRKTMGIKVIGPKPQVSFQVGAKIEVLCQDSGIRGCWFRCKILSMSLRLLKVQYDDLLDIDGPQKLEEWVPASRVAAPDKLGMRCSGRLTVRPCPPEYNTGHIFEIGAPVDAWWCDGWWEGVITAVNVNGDGILQVYTPGEERFLKVEKKNIRISRDWINNRWVDVQGKPDICSYLSSNVRSSIRMSANSAVVDGSMSDFSAMLESKPSPIAKFEVAKKVEPEKPSPTAKVEVAKKVEPELSCLEAPGDLENMKGITLREPLYAIHEDKDNNSGGGCDDEADKAVKTLLALNEHKDKNSGGGSDCDTDNDDDVDDDDVDDDEEDSEEDFDCSEPKLGAAEAIRVA 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00261 792 SMART BAH_4 240 359 IPR001025 GO:0003682
Pumo2g00261 792 ProSiteProfiles BAH domain profile. 240 359 IPR001025 GO:0003682
Pumo2g00261 792 MobiDBLite consensus disorder prediction 739 792 - -
Pumo2g00261 792 Pfam Agenet domain 468 543 IPR008395 -
Pumo2g00261 792 CDD Tudor_Agenet_AtDUF_rpt1_3 465 543 - -
Pumo2g00261 792 Gene3D - 207 372 IPR043151 -
Pumo2g00261 792 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 463 653 - -
Pumo2g00261 792 MobiDBLite consensus disorder prediction 752 777 - -
Pumo2g00261 792 MobiDBLite consensus disorder prediction 375 424 - -
Pumo2g00261 792 SMART agenet_At_2 463 528 IPR014002 -
Pumo2g00261 792 SMART agenet_At_2 549 607 IPR014002 -
Pumo2g00261 792 MobiDBLite consensus disorder prediction 380 417 - -
Pumo2g00261 792 Pfam BAH domain 241 334 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00261 Pumo-Chr2 5090740 5098253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00261 477 605 PHD Transcription Factor Family AT5G58610 28.571 7.96e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00261 - - gmx:100816046 1245.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00261 2 5090740 5098253 Pumo2g00261 2 5090740 5098253 ECH