Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00243 ATGCAAACCAAACCCCCTTCTTCTTCTTCCAATTCTTCATCCTCTTCGGCCATTGACACCTCCCTAGCCATCGCCACCAGATCTGATGATTATACCAAGAACCAGCCCAAGCAATCCACCAAGGACAGGCAAACCAAAGTAGATGGCGGTGGCCGCAGAATTCGAATGCCCGCCACCTGCGCCGCTAAGGTTTTCCAATTGACAAGAGAATTAGGCCACAAGTCCGACGGCGAGACTATCGAATGGCTCCTCCAGCAAGCCGAGCCTGCCATCATTGCCGCCACCGGCACCGGCACCATCCCCGCCAATTTCTCCACCCTCAACGTCTCCCTCTGTAGCACCGGCTCCACGCTCTCCGCGCTGCCATCTAAGTCAGCCCCCCACACCTTTCACGACGCCCTCGCACTTGCTCACCACCCTTACGTGGAAGCCTTTAAACACACTCAAACTCCGCACCCCCCTGCTGCTAACAATATTCCTAGCCTTTCAGAGGAGAACGACGAGATTGGAAGAAAGAGGGGCTAG 525 0.5562 MQTKPPSSSSNSSSSSAIDTSLAIATRSDDYTKNQPKQSTKDRQTKVDGGGRRIRMPATCAAKVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLCSTGSTLSALPSKSAPHTFHDALALAHHPYVEAFKHTQTPHPPAANNIPSLSEENDEIGRKRG 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00243 174 MobiDBLite consensus disorder prediction 1 52 - -
Pumo2g00243 174 MobiDBLite consensus disorder prediction 148 174 - -
Pumo2g00243 174 MobiDBLite consensus disorder prediction 1 33 - -
Pumo2g00243 174 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 11 136 IPR005333 GO:0003700
Pumo2g00243 174 Pfam TCP family transcription factor 39 143 IPR017887 -
Pumo2g00243 174 MobiDBLite consensus disorder prediction 34 50 - -
Pumo2g00243 174 ProSiteProfiles TCP domain profile. 40 94 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00243 Pumo-Chr2 4770736 4772227 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00243 37 153 TCP Transcription Factor Family AT1G35560 70.940 4.94e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pumo2g00243 TCP 3.1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00243 - - gmx:100814151 223.016