Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00240 ATGGGTGAACAATTGGGGCTGCTAAAAGTCATTGTTGTGCAAGGAAAAAGGTTGGTGATCCGGGATTTCAAGACCAGTGATCCTTATGTTGTGCTCAAACTAGGGAATCAGACTGCAAAGACCAAGGTAATCAATAGCTGCTTGAATCCTGTTTGGAATGAAGAGCTGAATTTCACTCTGACAGAACCCTTGGGAGTTCTGAATTTGGAAGTGTTTGATAAAGATCTTTTGAAGGCTGATGACAAGATGGGAAATGCTTTCCTGAACCTTCAACCAATAGTCTCTGCAGCCAGATTAAGAGACATCTTAAGAGTGTCCTCTGGTGAGACAACATTAAGGAAGGTCATACCTGATGCTGAAAACTGTCTTGTCCGTGAAAGCAGCATCAACTGTGTCAATGGTGAGGTGGTGCAGAATGTTTGGTTAAGGCTTCGTGGAGTAGAGTCTGGGGAACTAGAATTGACCATCAAGTTGGTCACACCTGTTGTTGCTCCTGCAACATAG 504 0.4365 MGEQLGLLKVIVVQGKRLVIRDFKTSDPYVVLKLGNQTAKTKVINSCLNPVWNEELNFTLTEPLGVLNLEVFDKDLLKADDKMGNAFLNLQPIVSAARLRDILRVSSGETTLRKVIPDAENCLVRESSINCVNGEVVQNVWLRLRGVESGELELTIKLVTPVVAPAT 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00240 167 Gene3D C2 domain 3 163 IPR035892 -
Pumo2g00240 167 CDD C2_ArfGAP 5 150 - -
Pumo2g00240 167 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 158 IPR035892 -
Pumo2g00240 167 PRINTS C2 domain signature 22 34 IPR000008 -
Pumo2g00240 167 PRINTS C2 domain signature 46 59 IPR000008 -
Pumo2g00240 167 PRINTS C2 domain signature 67 75 IPR000008 -
Pumo2g00240 167 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Pumo2g00240 167 Pfam C2 domain 7 99 IPR000008 -
Pumo2g00240 167 SMART C2_3c 7 102 IPR000008 -
Pumo2g00240 167 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 4 159 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00240 Pumo-Chr2 4574018 4576499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00240 1 157 C2H2 Transcription Factor Family AT4G05330 44.586 1.13e-37 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00240 - - gmx:100779624 313.923