Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00236 ATGTCTTTGTCTGCAACCTTAACTGAGACCTTGCACCATTCAGATGAAGGTGTGTCTGTGGAGGACAACAACTACTATGGCAGAAGTAGCAGTGTGTGTGAGATAGAGGAAGAGAACTCTTCACACTTGCACTTGAATGATGATGGTCCTAATCCTATGGTTACCATTGGTGAAGAAGAGAACCAGGATGAAGACACTGTTTATGTGGCTGTTGGTAAGAGCCAGAGTAGCATGGAAGCCTTGGCATGGACCCTCAACAACTTGGCCACTCCTTCTACCATGCTCTATCTCATACACGTTTTCCCAGAGATCAAGCTCCTTCCAAATCCATTGGGAGTAGGAATGATTCCAAAGGAACAAGTGAGTCCTGAGCAGGTAGAGAGCTACATGGCCCAAGAAAGAGGCAAGAGGAGAGAGCTTCTAAACAAATTCCTCCAATTATGCTCTGCTTCCAAGGTTAAGGTGGACACCATCCTGATTGAGAGTGACTTGATTGCAAAGGCTATCATTGACCTTATTCCAATTCTTCAAATAAAAAAACTAGTGATTGGAGCCAGCAAATCCCAAATAAGAAAATTGAGATCAAGGAAAGGGAGTGGCATAGCTGATCAGATACTTCAGAATGCTCCAGAAAGTTGCAAGGTGAGTATTGTATGTGAAGGAAAGGACGTAAATGAACAGATAACTTGTGCCATTGCTACTGATACTTCCATGTCCCAGAAAAACAAGCATCAGCAAAATGATTCGGCTTCTTGTGTTTGTTTTAACTTTTAA 774 0.4264 MSLSATLTETLHHSDEGVSVEDNNYYGRSSSVCEIEEENSSHLHLNDDGPNPMVTIGEEENQDEDTVYVAVGKSQSSMEALAWTLNNLATPSTMLYLIHVFPEIKLLPNPLGVGMIPKEQVSPEQVESYMAQERGKRRELLNKFLQLCSASKVKVDTILIESDLIAKAIIDLIPILQIKKLVIGASKSQIRKLRSRKGSGIADQILQNAPESCKVSIVCEGKDVNEQITCAIATDTSMSQKNKHQQNDSASCVCFNF 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00236 257 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 21 256 - -
Pumo2g00236 257 MobiDBLite consensus disorder prediction 1 23 - -
Pumo2g00236 257 CDD STK_N 66 221 - -
Pumo2g00236 257 Gene3D HUPs 56 230 IPR014729 -
Pumo2g00236 257 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 66 210 - -
Pumo2g00236 257 Pfam Universal stress protein family 66 211 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00236 Pumo-Chr2 4484923 4487012 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00236 70 222 Plant U-box Gene Family AT5G57035 31.373 4.67e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00236 - - gmx:100781056 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00075 4 1126733 1128869 Pumo2g00236 2 4484923 4487012 PCT