LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo2g00235	ATGTCAACGATGTCAGGGGAAACGGGGCATGAATATTGTTTGCACTATGATTCCGATGAAGAAACCTCCTCTAGTTGCTCTTGCGGTTTCATTGGGTTCAGGAGAAACCAAGTGTTCGATTGCAACACCAACGAAGAAGATTCAGAGGAGCTATTTGAGATCAATCTGAAGAAGCCATTGGATACAATATCAGAAGAAGACTGCGAGAGCAGTGTGTTCTCTTTTGATTTTCATAACGAGAATGATGTTGTTCATGTGGCAGTGGACCACGTTGGGGAATCAAGCATGGAAGCGCTTTTATGGACTTTGAAACATGCTGTCACACCCTCTACTACCACTGTCTATCTCATACATGTTTTCCCTGAAATCAGGCTCATCCCAAGTCCATTTGGAAAATTTCCAAGGAGTCGTGTAAATCCAGAGTATGTTAACTTTCACTTGACTCAACAGAAAGCCAAGAAGAAAGTGCTCTTTCAAAAGTTCATTGACGTGTGCCTTGATTCAAAGGTTAAGGTGGAGATGATTCTTCTTGAGGGTGACAACGTTGCCAAAGCTATAACAGACCTTGTTAGAGATCATAGTATAAGGAAATTGGTGATCGGAATTAGCAAATCTAATTTAAGCAAATCCGTCTCTAGAAAACAAAATGCCATAGCAGATAAGGTCCTCAGAAATGCACCAGAAATCTGTGATGTTAAAATAATATGCGATGGAAAGGAAGTGATTGATCAAATGATTGGTTGCAATTCATCATCTTCCGGTGACAGTAGCAGTTCCAGAGTTTCACAAGAAGAGAATGAATCCGGTGGTTTTGTTCCTCTTATGCGTTTTGTGCCTAATCCTATATGGTTATTCAGACCAAGATTTTGA	870	0.4046	MSTMSGETGHEYCLHYDSDEETSSSCSCGFIGFRRNQVFDCNTNEEDSEELFEINLKKPLDTISEEDCESSVFSFDFHNENDVVHVAVDHVGESSMEALLWTLKHAVTPSTTTVYLIHVFPEIRLIPSPFGKFPRSRVNPEYVNFHLTQQKAKKKVLFQKFIDVCLDSKVKVEMILLEGDNVAKAITDLVRDHSIRKLVIGISKSNLSKSVSRKQNAIADKVLRNAPEICDVKIICDGKEVIDQMIGCNSSSSGDSSSSRVSQEENESGGFVPLMRFVPNPIWLFRPRF	289

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo2g00235	289	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	86	234	-	-
	Pumo2g00235	289	Gene3D	HUPs	77	240	IPR014729	-
	Pumo2g00235	289	PANTHER	U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE	45	265	-	-
	Pumo2g00235	289	Pfam	Universal stress protein family	82	227	IPR006016	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo2g00235	Pumo-Chr2	4480977	4482672	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo2g00235	92	259	Plant U-box Gene Family	AT5G57035	30.588	1.02e-13	69.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo2g00235	-		-	gmx:100818837	481.1