Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00234 ATGGACTCAAAAACTAGTGCTAGAGCTCTCCCGAAGCACCATCAGAAGACGGCCGGGATTCAAACCCTTGAGGCGAAAGACGGAGGGTCTTCTTTGCAGAAGACGGGGAAAACGGAGCTGGCTGCTCCTGTGGATTTATCAAAGTCTGTAGCGAACACATCCAAGCAGAATACTGGGGAAACTGCTGAAAGCAAGAAGTTAGGAGGTTCAACTCAAAAGGGGTCTGCTGATTCCTTGAGCAATAAAAGTGGTTCTGGCGCTTCCTCGTCTGTTCTAGACAAAGCGAATCGCGCTGCTAATGAGAACATAGGCTCACAGGAAAGCTCTATTGATCAAGACAAGAAGACGTCGGAAGATGGAAGTGTGAAGAACAGTTCTGTTTCTGCCAAAGTTAGTGATGGGGCCAGCAGTCTTGCAAAGACAAGTGGAAGTGCCAAGATCAGCAACCGAGCTGATTTTGTTGAGAGTGGTAAGAGCAGTATTTGCAGAGGAAGCACAAGCAGTGATGTGAGTGATGAGAGTACTTGTAGTAGCTTTAGTAGCAGCATAAACAAACCTCACAAGGCAAATGACTTGAGATGGGAAGCTATCCAAGCAGTTCGAAGTAGAGATGGGGTGTTGGGTTTAAGTCACTTTAGATTACTGAAGAGGCTGGGTTGTGGGGATATTGGAAGTGTTTACCTCTCTGAGTTGAGTGGAACTAAATGTTACTTTGCAATGAAGGTAATGGACAAAGGGTCCCTAGCAAGTCGTAAAAAGCTACTTCGTGCTCAGACGGAACGAGAAATTCTGCAGTCTCTTGATCACCCTTTTCTCCCAACTTTGTACACCCATTTTGAGACAGAGAAATTCTCATGCTTGGTTATGGAATTCTGCCCAGGTGGAGACCTCCATACTCTTAGGCAGAAGCAACCAGGGAAGCATTTTCCTGAGCAGGCAGTAAAATTCTATGTGGCAGAGGTCCTACTGGCTTTGGAGTACCTTCACATGCTTGGGATTGTCTACCGTGATCTTAAGCCAGAAAATGTCCTTGTTAGGGATGACGGACATATTATGCTCTCTGACTTTGACCTCTCCCTCCGATGTGCTGTTAGTCCGACCCTCGTTAAAACCTCATCCACGGATTCTGAGCCTTTAAGAAAGAATCCTGTTTACTGTGTCCAACCTGCATGTATTGAGCCACCTTCCTGCATCCAGCCATCCTGTGTTGCTCCTACTACGTGCTTTTCACCCCGGCTCTTCTCTAGCAAATCAAAGAAAGACCGGAAGCCGAAAACTGAAATCGGCAACCAAGTGAGTCCATTACCTGAGCTCATTGCAGAGCCTACCGATGCTCGGTCCATGTCATTTGTTGGAACTCATGAATACTTGGCACCGGAGATCATTAAGGGTGAAGGTCACGGGAGTGCGGTTGATTGGTGGACTTTTGGGATCTTTCTATATGAGCTGTTGTTCGGTAAAACGCCTTTCAAGGGATCCGGTAACCGAGCAACATTGTTTAACGTCGTCGGTCAGCCACTGCGATTTCCAGAAGCACCTGTTGTGAGTTTTGCAGCAAGGGATCTTATAAGGGGGTTACTTGTAAAAGAACCTCAGCACAGATTGGCATACAAAAGAGGGGCTACTGAGATCAAGCAACACCCCTTTTTTGAAGGTGTGAATTGGGCATTGATCAGATGTGCTACCCCACCTGAGATCCCAAAGGCTGTAGAGTTTGAGAAGATACCCTCACCAGCTTCATCAAGTGGTGGTGAAAAGGCTGTTAACCACATGTCAATAGCTAATCAGAAAGGTTCTGATAATTATCTGGAGTTTGATTTCTTCTAG 1827 0.4636 MDSKTSARALPKHHQKTAGIQTLEAKDGGSSLQKTGKTELAAPVDLSKSVANTSKQNTGETAESKKLGGSTQKGSADSLSNKSGSGASSSVLDKANRAANENIGSQESSIDQDKKTSEDGSVKNSSVSAKVSDGASSLAKTSGSAKISNRADFVESGKSSICRGSTSSDVSDESTCSSFSSSINKPHKANDLRWEAIQAVRSRDGVLGLSHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKTSSTDSEPLRKNPVYCVQPACIEPPSCIQPSCVAPTTCFSPRLFSSKSKKDRKPKTEIGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKAVEFEKIPSPASSSGGEKAVNHMSIANQKGSDNYLEFDFF 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00234 608 FunFam serine/threonine-protein kinase D6PK-like 296 363 - -
Pumo2g00234 608 Gene3D Transferase(Phosphotransferase) domain 1 444 568 - -
Pumo2g00234 608 MobiDBLite consensus disorder prediction 1 141 - -
Pumo2g00234 608 CDD STKc_phototropin_like 210 568 - -
Pumo2g00234 608 Pfam Protein kinase domain 447 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00234 608 Pfam Protein kinase domain 213 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00234 608 FunFam Serine/threonine-protein kinase AGC1-7 443 568 - -
Pumo2g00234 608 SUPERFAMILY Protein kinase-like (PK-like) 187 570 IPR011009 -
Pumo2g00234 608 PANTHER FLIPPASE KINASE 1-RELATED 55 574 - -
Pumo2g00234 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 333 345 IPR008271 GO:0004672|GO:0006468
Pumo2g00234 608 FunFam Serine/threonine-protein kinase D6PK-like 210 295 - -
Pumo2g00234 608 Gene3D Phosphorylase Kinase; domain 1 210 295 - -
Pumo2g00234 608 ProSiteProfiles Protein kinase domain profile. 212 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00234 608 Gene3D Transferase(Phosphotransferase) domain 1 296 371 - -
Pumo2g00234 608 MobiDBLite consensus disorder prediction 47 110 - -
Pumo2g00234 608 MobiDBLite consensus disorder prediction 121 141 - -
Pumo2g00234 608 SMART serkin_6 212 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00234 Pumo-Chr2 4473087 4477352 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00234 36 608 AGC Kinase Gene Family AT5G47750 78.223 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pumo2g00234 Pkinase 1.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00234 K08286 - gmx:100781600 1133.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00234 2 4473087 4477352 Pumo2g00234 2 4473087 4477352 ECH