Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00211 ATGTATCCGAGGCTCATACACCCCCACGATGGGATTGTGCCGCAGGATGACATGCAGGGTGCTGCTTCCAACCTCTCTCACACTCACAAGGGTGACCCTTGTCTCGTTCTAACCGCTGATCCCAAGCCTCGTCTTCGTTGGACTCAGGACTTGCATGAACGGTTTGTTGATGCGGTCACGCAGCTTGGGGGAGCAAGCAAAGCTACACCTAAAGCTATCATGCGGACCATGAATGTCAAGGGTTTGACTCTGTTTCATTTGAAGAGTCATCTTCAGAAATACAGGCTTGGTAAGCAATCTGGGAAAGATGTGGGAGAAGGATGCAAAGATGGTTCATATCTTTTAGAAAGCCCTGGCACTGATAACTCTTCTCCGAAGTTGCCAACTTCTGATACAAACGAGGGTTATGAAATCAAGGAGGCATTGAGAGCACAGATGGAAGTGCAGAGTAAATTACATTTGCAAGTTGAGGCGGAGAAGCACTTGCAGATTCGCCAGGATGCGGAAAGGAGATACATGGCCATGCTTGAAAGAGCTTGCAAGATGCTGGCTGATCAATTTATCGGTGCTACAGTTATAGACACAGACAGCCAAAAGTTCCAAGGCATTGGAAGCAAAGCGCCTAGAGGTACCTTGGTTGATCCTCTTGGTTTTTACTCCTTGCCATCCACTGAGGTGGTCGGAGTGAATGTCCCGGAAGAAGAAATACCGCCAGAGTCTCCCTCCCCAAAGGGCTGA 738 0.4878 MYPRLIHPHDGIVPQDDMQGAASNLSHTHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDVGEGCKDGSYLLESPGTDNSSPKLPTSDTNEGYEIKEALRAQMEVQSKLHLQVEAEKHLQIRQDAERRYMAMLERACKMLADQFIGATVIDTDSQKFQGIGSKAPRGTLVDPLGFYSLPSTEVVGVNVPEEEIPPESPSPKG 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00211 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 99 IPR017930 -
Pumo2g00211 245 SUPERFAMILY Homeodomain-like 42 98 IPR009057 -
Pumo2g00211 245 Pfam Myb-like DNA-binding domain 45 95 IPR001005 -
Pumo2g00211 245 Pfam MYB-CC type transfactor, LHEQLE motif 137 182 IPR025756 -
Pumo2g00211 245 MobiDBLite consensus disorder prediction 116 131 - -
Pumo2g00211 245 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 21 197 IPR044848 GO:0003700
Pumo2g00211 245 FunFam Myb family transcription factor 41 99 - -
Pumo2g00211 245 NCBIfam myb-like DNA-binding domain, SHAQKYF class 42 97 IPR006447 GO:0003677
Pumo2g00211 245 Gene3D - 41 99 - -
Pumo2g00211 245 MobiDBLite consensus disorder prediction 99 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00211 Pumo-Chr2 4133034 4138603 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00211 31 231 G2-like Transcription Factor Family AT3G24120 50.467 1.07e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pumo2g00211 Myb_DNA-binding 3.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00211 - - gmx:100786397 444.506