Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00202 ATGGCCTCGGAGTTAGAAATTTCTCCGGCGGACGCTGCTCGCAAGGCTCCCGGCAAGGAGCAGCAAGCCGCCGGCGTCGGAATCCTTCTGCAGATCATGATGCTGGTCTTGTCCTTCGTCCTCGGCCACGTTCTCCGTCGCAAGAAGGTTTACATCATCCCCGAAGCCAGTGCTTCTCTTTTAATAGGGTTAATTGTTGGCATACTAGCAAACATTTCAGACACTGAAACCAGTATCAGGGGGTGGTTCAATTTTCACGAGGAATTTTTCTTCCTGTTCCTGTTGCCACCGATCATATTTCAGTCTGGGTTCAGTCTCGCACCTAAACCCTTTTTCTCAAATTTTGGAGCAATTGTCACATTTGCTATATTCGGTACCTTTATAGCTTCAATTGTAACGGGTGTCTTGGTTTATCTTGGTGGCTTGGTCTTTCTGATGTATAGGCTACCTTTCGTTGAGTGCCTGATGTTTGGTGCTCTTATATCAGCTACCGATCCTGTTACTGTTTTGTCCATATTTCAGGAGCTGGGCACAGATGTCAATCTATATGCCTTGGTTTTTGGAGAATCTGTTTTGAATGATGCAATGGCAATTTCTTTGTACAGGACAATGTCATCAGTTAAAGCTCATCCATCTGGACAAAATTTATTCATGGTGGTTGTTCGATTTTTGGAGACTTTTGTAGGGTCAATGTCTGCAGGTGTTGGAGTTGGATTTATATCTGCTTTGCTCTTTAAGTATGCAGGATTGGATATTGACAACCTTCAGAACTTGGAGAGTTGTCTTTTTGTCCTTTTCCCATATTTCTCGTACATGCTTGCTGAAGGCCTTGGTCTGTCTGGTATTGTATCAATACTGTTCACAGGAATAGTCATGAAACATTATACATATTCCAATTTGTCACAAAGTTCTCAACGGTTTGCCTCTGCTTTTTTCGAGTTGATATCATCTTTAGCTGAAACATTTGTATTTATATACATGGGCTTTGATATTGCTATGGAGCAACATAGCTGGTCACATGTTGGATTTATATTCTTCTCCATTATATTCATTGGAATTGCAAGGGCAGCAAATGTCTTCTCTTGTGCTTATTTGGTCAATCTGGTCAGACCCTCTCATCGAAAGATTCCTCCAAAACATCAGAAGGCACTTTGGTATAGTGGACTTCGAGGAGCAATGGCTTTTGCGCTTGCTCTGCAATCAATTCATGATCTTCCAGAAGGACATGGACAGACCATCTTTACTGCAACTACTGCTATAGTTGTTTTGACGGTATTGCTGATTGGTGGTTCAACAGGTACCATGCTGGAAGCTCTAGATGTTGTAGGTGGAGATAATGATAGCCCTTTGGCATCTGTTGGTACCATCACAAATTTTGATGGAAACAGTGGTTATATTGCTCCTCCTTACAACGAAGAATCTTCTTCAGGGAACAAAATCAAGATGAAGTTAAAAGAATTTCACAAGAGTGCTGCATCTTTTACGGCATTAGATAAAAACTACCTGACCCCATTCTTTACAAGTCAAAATGGAGATGATGATGAAGGTAAGTTTGATTTTAAGTTTTATTTAAAACTTTATCATTCTCATTTCTCACTGAAGAATTGA 1608 0.4098 MASELEISPADAARKAPGKEQQAAGVGILLQIMMLVLSFVLGHVLRRKKVYIIPEASASLLIGLIVGILANISDTETSIRGWFNFHEEFFFLFLLPPIIFQSGFSLAPKPFFSNFGAIVTFAIFGTFIASIVTGVLVYLGGLVFLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSSVKAHPSGQNLFMVVVRFLETFVGSMSAGVGVGFISALLFKYAGLDIDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGIVMKHYTYSNLSQSSQRFASAFFELISSLAETFVFIYMGFDIAMEQHSWSHVGFIFFSIIFIGIARAANVFSCAYLVNLVRPSHRKIPPKHQKALWYSGLRGAMAFALALQSIHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLEALDVVGGDNDSPLASVGTITNFDGNSGYIAPPYNEESSSGNKIKMKLKEFHKSAASFTALDKNYLTPFFTSQNGDDDEGKFDFKFYLKLYHSHFSLKN 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00202 535 PANTHER SODIUM/HYDROGEN EXCHANGER 12 517 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Pumo2g00202 535 NCBIfam sodium/hydrogen exchanger 3 32 446 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pumo2g00202 535 Pfam Sodium/hydrogen exchanger family 34 437 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pumo2g00202 535 Gene3D - 151 203 - -
Pumo2g00202 535 PRINTS Na+/H+ exchanger signature 89 100 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pumo2g00202 535 PRINTS Na+/H+ exchanger signature 103 117 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pumo2g00202 535 PRINTS Na+/H+ exchanger signature 118 126 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pumo2g00202 535 PRINTS Na+/H+ exchanger signature 158 168 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00202 Pumo-Chr2 4044971 4053873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00202 20 439 Antiporters AT3G05030 34.389 1.02e-54 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00202 K14724 - gmx:100781280 904.434