Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00193 ATGGGTGAAAGAATTCTAGTATTCCTATTACTCTTTTTCACTCATTCGTTGATTGTACTAGCAAAGACATCAACTCAGGATTACACTGCTTTGCTGGCTCTAATGAATGAATGGCAGAACACACCACCTAATTGGGTGGGTTCTGATCCTTGTGGTGATGGTTGGGATGGCATTGAGTGTACCAATTCACGCGTTACCTCCATATCATTAGCAAGCATAGATTTGTCTGGCCAGCTTTCTTCAGATATTGGATTACTATCCGAACTGCTGATTTTGGATCTGTCTTACAATAAAAAATTAACTGGACCACTTCCAAATGACATTGGAAACTTGAGAAAGCTGAGAAACTTACTTCTTATTAATTGTGGTTTCACTGGTCCTATCCCAGTTACAATTGGAAATCTAGAACGGCTTGTCTTCCTATCTTTAAATTCTAATGGCTTCACTGGGACAATTCCAGCTGCCATTGGTAATCTCTCAAATGTTTATTGGCTAGACTTAGCCGAAAACCAGCTTGAAGGGCCCATCCCCATATCTAATGGAACTACTCCTGGTCTTGATATGATGCACGATACAAAGCACTTTCATTTTGGGAAGAATAAGCTTTCAGGAAACATTCCTTCTCAACTTTTTAGCCCGGAAATGTCTCTCATACATGTGCTTTTTGAATACAACCGATTTACTGGCAGCATTCCATCTACGCTTGGCCTTGTCAAGACTCTGGAGGTGGTGCGTTTTGATAATAACTTTTTAAGTGAACCTTTGCCTCTGAACATCAACAATCTTACAAGTGTTAGGGAATTGTTCCTGTCCAACAATCGCCTGCCTGGTTCCCCTCCAAATCTTACTGGAATGAATTCCCTCAGTTACCTAGATATGAGCAACAATAGTTTTGATCCATCAGACTTTCCACCATGGTTGCCAACTCTTCCAGCTCTGACGACAATAATGATGGAGAGTACAAAACTTCAAGGACGTATTCCTGTTTCTTTGTTCAGCCTGCAACAGTTGCAGACAGTGGTGCTGAAAGACAACCAGCTAAACGGCACTTTAGATATTGGCACCTCTATCAGCAACCAACTGGATCTCCTTGATTTGCAGATTAATTTAATTGAAGATTTTGATCCACAAGTTGATGTCTCTGAAGTGGAGATAATACTTGTGAATAATCCAATTTGCCAAGAGACAGGAGTTCCACAGACTTATTGCTCCATTACAAAATCCAATGACTCATATTCAACGCCACCAAATAACTGTGTGCCTGTTCCCTGCACCTTAGATCATCATCTGATACTAAGCCCCAAGTGTAAATGTGCATACCCATATACAGGAACTTTATTTCTCAGAGCTCCTTCCTTCTCAGACTTGGGAAACAAGACTGTCTTTGTAACCCTGGAGTTATCTCTGATGCAGTCTTTTCAACTTCATGATAAACCTGTGGATTCAGTTGCTTTAAGCAATCCAAGGAAGAACACATTTCAGTACCTTGAAGTGACTTTACAAATATTTCCATCAGATCAAGATCGTTTCAATCGAACAGGGATTTCTGGTATAGGCTTTATTCTCAGCAACCAAACATACAAGCCTCCTCCAATGTTTGGACCATACTATTTTATTGCTGATGAGTATGAACACTATGTGGATAATTCAGGTCCTGTGGCATCCAGTAGTAAATCTTCAAATACTGGCATCATAGCTGGAGCTGCTGCTGGTGGTGCTGCCCTTTTGGTGTTAGTACTCCTTGCATGTGTGTATGCTATCAGCCGGAAGAAAAAGTCAAAAAAATCAACTGGGAATAGCAATCCTTTTGAACAATGGGATCCGCATGAGAGCAATAGTAGCATCCCACAGTTGAAAGGAGCAAGGCGCTTCACTTTTGAAGAGATACAGAAATACACCAAAAACTTTTCACAAGTCAATAATATAGGATTTGGCGGTTATGGGAAGGTTTATCGGGGAACTCTTCCCAACGGGCAACTAATTGCAGTAAAGCGAGCTCAAAAGGAATCTATGCAAGGAGGGTTGGAGTTCAAAACTGAGATTGAACTTCTATCAAGGGTCCACCATAAAAATCTTGTTAGCCTTGTTGGTTTCTGCTATGGGCAAGGAGAACAAATGCTGATATATGAGTACGTTGCAAATGGTACTTTGAAGGATACTCTTTCAGGGAAGTCTGGAATAAGATTGGACTGGATTAGAAGGCTAAAAATAGCCCTTGGTGCTGCCAGGGGGCTGGATTATCTGCATGAACTTGCCAATCCTCCAATCATACACAGGGACATCAAATCCACTAACATCTTACTGGATGAGCGCTTGAATGCTAAAGTATCTGATTTTGGTCTCTCCAAGCCTTTGGGTGATGGTGCAAAAGGTTATATTACCACACAAGTCAAAGGAACAATGGGCTACTTGGACCCAGAGTATTATATGACTCAACAGTTGACTGAGAAAAGTGATGTTTATAGCTTTGGAGTGCTAATGTTGGAGCTGATAACTGCAAGAAGGCCAATAGAGCGAGGGAAATATATTGTGAAAGTGGTTAAGGGTGCTATTGACAAGACAAAAGGCTTCTATGGTCTTGAGGAAATTCTTGATCCAACTATTGAAATGGGGACAGCACTCAGCGGTTTTGAGAAGTTTGTGGATCTTGCAATGCAGTGTGTTGAAGAGTCAAGTTCTGACAGGCCTACAATGAATTATGTTGTGAAAGAAATTGAAAACTTGTTGCAGTTGGCCGGTTCAAGCCCCATTTTATCAGCATCAGCATCAGCATCAGCATCCACTTCATCTAGTTATAATAATGTAACTAAAAGTTCCCAGCATCCTTACGAAAATGAATACTTTGATTCAAGTGTGGTACTTCCACGTGCATAA 2874 0.4092 MGERILVFLLLFFTHSLIVLAKTSTQDYTALLALMNEWQNTPPNWVGSDPCGDGWDGIECTNSRVTSISLASIDLSGQLSSDIGLLSELLILDLSYNKKLTGPLPNDIGNLRKLRNLLLINCGFTGPIPVTIGNLERLVFLSLNSNGFTGTIPAAIGNLSNVYWLDLAENQLEGPIPISNGTTPGLDMMHDTKHFHFGKNKLSGNIPSQLFSPEMSLIHVLFEYNRFTGSIPSTLGLVKTLEVVRFDNNFLSEPLPLNINNLTSVRELFLSNNRLPGSPPNLTGMNSLSYLDMSNNSFDPSDFPPWLPTLPALTTIMMESTKLQGRIPVSLFSLQQLQTVVLKDNQLNGTLDIGTSISNQLDLLDLQINLIEDFDPQVDVSEVEIILVNNPICQETGVPQTYCSITKSNDSYSTPPNNCVPVPCTLDHHLILSPKCKCAYPYTGTLFLRAPSFSDLGNKTVFVTLELSLMQSFQLHDKPVDSVALSNPRKNTFQYLEVTLQIFPSDQDRFNRTGISGIGFILSNQTYKPPPMFGPYYFIADEYEHYVDNSGPVASSSKSSNTGIIAGAAAGGAALLVLVLLACVYAISRKKKSKKSTGNSNPFEQWDPHESNSSIPQLKGARRFTFEEIQKYTKNFSQVNNIGFGGYGKVYRGTLPNGQLIAVKRAQKESMQGGLEFKTEIELLSRVHHKNLVSLVGFCYGQGEQMLIYEYVANGTLKDTLSGKSGIRLDWIRRLKIALGAARGLDYLHELANPPIIHRDIKSTNILLDERLNAKVSDFGLSKPLGDGAKGYITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELITARRPIERGKYIVKVVKGAIDKTKGFYGLEEILDPTIEMGTALSGFEKFVDLAMQCVEESSSDRPTMNYVVKEIENLLQLAGSSPILSASASASASTSSSYNNVTKSSQHPYENEYFDSSVVLPRA 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00193 957 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 712 921 - -
Pumo2g00193 957 FunFam Leucine-rich repeat protein kinase family protein 182 281 - -
Pumo2g00193 957 Gene3D Ribonuclease Inhibitor 279 415 IPR032675 -
Pumo2g00193 957 CDD STKc_IRAK 642 908 - -
Pumo2g00193 957 FunFam Leucine-rich repeat family protein 26 181 - -
Pumo2g00193 957 SUPERFAMILY L domain-like 30 298 - -
Pumo2g00193 957 SMART serkin_6 636 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00193 957 Pfam Protein kinase domain 637 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00193 957 SUPERFAMILY L domain-like 258 376 - -
Pumo2g00193 957 ProSiteProfiles Protein kinase domain profile. 636 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00193 957 Gene3D Phosphorylase Kinase; domain 1 607 711 - -
Pumo2g00193 957 MobiDBLite consensus disorder prediction 598 617 - -
Pumo2g00193 957 PANTHER RECEPTOR-LIKE PROTEIN 55 36 907 - -
Pumo2g00193 957 Gene3D Transferase(Phosphotransferase) domain 1 712 917 - -
Pumo2g00193 957 SUPERFAMILY Protein kinase-like (PK-like) 622 930 IPR011009 -
Pumo2g00193 957 MobiDBLite consensus disorder prediction 593 617 - -
Pumo2g00193 957 FunFam Leucine-rich repeat protein kinase family protein 601 711 - -
Pumo2g00193 957 ProSitePatterns Serine/Threonine protein kinases active-site signature. 756 768 IPR008271 GO:0004672|GO:0006468
Pumo2g00193 957 ProSitePatterns Protein kinases ATP-binding region signature. 642 664 IPR017441 GO:0005524
Pumo2g00193 957 Gene3D Ribonuclease Inhibitor 19 181 IPR032675 -
Pumo2g00193 957 Gene3D Ribonuclease Inhibitor 182 278 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00193 Pumo-Chr2 3935468 3943879 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00193 7 957 Receptor kinase-like Gene Family AT5G49760 57.128 0.0 1033
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pumo2g00193 Pkinase 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00193 - - gmx:100782366 1640.17