Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo2g00193 | ATGGGTGAAAGAATTCTAGTATTCCTATTACTCTTTTTCACTCATTCGTTGATTGTACTAGCAAAGACATCAACTCAGGATTACACTGCTTTGCTGGCTCTAATGAATGAATGGCAGAACACACCACCTAATTGGGTGGGTTCTGATCCTTGTGGTGATGGTTGGGATGGCATTGAGTGTACCAATTCACGCGTTACCTCCATATCATTAGCAAGCATAGATTTGTCTGGCCAGCTTTCTTCAGATATTGGATTACTATCCGAACTGCTGATTTTGGATCTGTCTTACAATAAAAAATTAACTGGACCACTTCCAAATGACATTGGAAACTTGAGAAAGCTGAGAAACTTACTTCTTATTAATTGTGGTTTCACTGGTCCTATCCCAGTTACAATTGGAAATCTAGAACGGCTTGTCTTCCTATCTTTAAATTCTAATGGCTTCACTGGGACAATTCCAGCTGCCATTGGTAATCTCTCAAATGTTTATTGGCTAGACTTAGCCGAAAACCAGCTTGAAGGGCCCATCCCCATATCTAATGGAACTACTCCTGGTCTTGATATGATGCACGATACAAAGCACTTTCATTTTGGGAAGAATAAGCTTTCAGGAAACATTCCTTCTCAACTTTTTAGCCCGGAAATGTCTCTCATACATGTGCTTTTTGAATACAACCGATTTACTGGCAGCATTCCATCTACGCTTGGCCTTGTCAAGACTCTGGAGGTGGTGCGTTTTGATAATAACTTTTTAAGTGAACCTTTGCCTCTGAACATCAACAATCTTACAAGTGTTAGGGAATTGTTCCTGTCCAACAATCGCCTGCCTGGTTCCCCTCCAAATCTTACTGGAATGAATTCCCTCAGTTACCTAGATATGAGCAACAATAGTTTTGATCCATCAGACTTTCCACCATGGTTGCCAACTCTTCCAGCTCTGACGACAATAATGATGGAGAGTACAAAACTTCAAGGACGTATTCCTGTTTCTTTGTTCAGCCTGCAACAGTTGCAGACAGTGGTGCTGAAAGACAACCAGCTAAACGGCACTTTAGATATTGGCACCTCTATCAGCAACCAACTGGATCTCCTTGATTTGCAGATTAATTTAATTGAAGATTTTGATCCACAAGTTGATGTCTCTGAAGTGGAGATAATACTTGTGAATAATCCAATTTGCCAAGAGACAGGAGTTCCACAGACTTATTGCTCCATTACAAAATCCAATGACTCATATTCAACGCCACCAAATAACTGTGTGCCTGTTCCCTGCACCTTAGATCATCATCTGATACTAAGCCCCAAGTGTAAATGTGCATACCCATATACAGGAACTTTATTTCTCAGAGCTCCTTCCTTCTCAGACTTGGGAAACAAGACTGTCTTTGTAACCCTGGAGTTATCTCTGATGCAGTCTTTTCAACTTCATGATAAACCTGTGGATTCAGTTGCTTTAAGCAATCCAAGGAAGAACACATTTCAGTACCTTGAAGTGACTTTACAAATATTTCCATCAGATCAAGATCGTTTCAATCGAACAGGGATTTCTGGTATAGGCTTTATTCTCAGCAACCAAACATACAAGCCTCCTCCAATGTTTGGACCATACTATTTTATTGCTGATGAGTATGAACACTATGTGGATAATTCAGGTCCTGTGGCATCCAGTAGTAAATCTTCAAATACTGGCATCATAGCTGGAGCTGCTGCTGGTGGTGCTGCCCTTTTGGTGTTAGTACTCCTTGCATGTGTGTATGCTATCAGCCGGAAGAAAAAGTCAAAAAAATCAACTGGGAATAGCAATCCTTTTGAACAATGGGATCCGCATGAGAGCAATAGTAGCATCCCACAGTTGAAAGGAGCAAGGCGCTTCACTTTTGAAGAGATACAGAAATACACCAAAAACTTTTCACAAGTCAATAATATAGGATTTGGCGGTTATGGGAAGGTTTATCGGGGAACTCTTCCCAACGGGCAACTAATTGCAGTAAAGCGAGCTCAAAAGGAATCTATGCAAGGAGGGTTGGAGTTCAAAACTGAGATTGAACTTCTATCAAGGGTCCACCATAAAAATCTTGTTAGCCTTGTTGGTTTCTGCTATGGGCAAGGAGAACAAATGCTGATATATGAGTACGTTGCAAATGGTACTTTGAAGGATACTCTTTCAGGGAAGTCTGGAATAAGATTGGACTGGATTAGAAGGCTAAAAATAGCCCTTGGTGCTGCCAGGGGGCTGGATTATCTGCATGAACTTGCCAATCCTCCAATCATACACAGGGACATCAAATCCACTAACATCTTACTGGATGAGCGCTTGAATGCTAAAGTATCTGATTTTGGTCTCTCCAAGCCTTTGGGTGATGGTGCAAAAGGTTATATTACCACACAAGTCAAAGGAACAATGGGCTACTTGGACCCAGAGTATTATATGACTCAACAGTTGACTGAGAAAAGTGATGTTTATAGCTTTGGAGTGCTAATGTTGGAGCTGATAACTGCAAGAAGGCCAATAGAGCGAGGGAAATATATTGTGAAAGTGGTTAAGGGTGCTATTGACAAGACAAAAGGCTTCTATGGTCTTGAGGAAATTCTTGATCCAACTATTGAAATGGGGACAGCACTCAGCGGTTTTGAGAAGTTTGTGGATCTTGCAATGCAGTGTGTTGAAGAGTCAAGTTCTGACAGGCCTACAATGAATTATGTTGTGAAAGAAATTGAAAACTTGTTGCAGTTGGCCGGTTCAAGCCCCATTTTATCAGCATCAGCATCAGCATCAGCATCCACTTCATCTAGTTATAATAATGTAACTAAAAGTTCCCAGCATCCTTACGAAAATGAATACTTTGATTCAAGTGTGGTACTTCCACGTGCATAA | 2874 | 0.4092 | MGERILVFLLLFFTHSLIVLAKTSTQDYTALLALMNEWQNTPPNWVGSDPCGDGWDGIECTNSRVTSISLASIDLSGQLSSDIGLLSELLILDLSYNKKLTGPLPNDIGNLRKLRNLLLINCGFTGPIPVTIGNLERLVFLSLNSNGFTGTIPAAIGNLSNVYWLDLAENQLEGPIPISNGTTPGLDMMHDTKHFHFGKNKLSGNIPSQLFSPEMSLIHVLFEYNRFTGSIPSTLGLVKTLEVVRFDNNFLSEPLPLNINNLTSVRELFLSNNRLPGSPPNLTGMNSLSYLDMSNNSFDPSDFPPWLPTLPALTTIMMESTKLQGRIPVSLFSLQQLQTVVLKDNQLNGTLDIGTSISNQLDLLDLQINLIEDFDPQVDVSEVEIILVNNPICQETGVPQTYCSITKSNDSYSTPPNNCVPVPCTLDHHLILSPKCKCAYPYTGTLFLRAPSFSDLGNKTVFVTLELSLMQSFQLHDKPVDSVALSNPRKNTFQYLEVTLQIFPSDQDRFNRTGISGIGFILSNQTYKPPPMFGPYYFIADEYEHYVDNSGPVASSSKSSNTGIIAGAAAGGAALLVLVLLACVYAISRKKKSKKSTGNSNPFEQWDPHESNSSIPQLKGARRFTFEEIQKYTKNFSQVNNIGFGGYGKVYRGTLPNGQLIAVKRAQKESMQGGLEFKTEIELLSRVHHKNLVSLVGFCYGQGEQMLIYEYVANGTLKDTLSGKSGIRLDWIRRLKIALGAARGLDYLHELANPPIIHRDIKSTNILLDERLNAKVSDFGLSKPLGDGAKGYITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELITARRPIERGKYIVKVVKGAIDKTKGFYGLEEILDPTIEMGTALSGFEKFVDLAMQCVEESSSDRPTMNYVVKEIENLLQLAGSSPILSASASASASTSSSYNNVTKSSQHPYENEYFDSSVVLPRA | 957 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo2g00193 | 957 | FunFam | LRR receptor-like serine/threonine-protein kinase HSL2 | 712 | 921 | - | - | |
Pumo2g00193 | 957 | FunFam | Leucine-rich repeat protein kinase family protein | 182 | 281 | - | - | |
Pumo2g00193 | 957 | Gene3D | Ribonuclease Inhibitor | 279 | 415 | IPR032675 | - | |
Pumo2g00193 | 957 | CDD | STKc_IRAK | 642 | 908 | - | - | |
Pumo2g00193 | 957 | FunFam | Leucine-rich repeat family protein | 26 | 181 | - | - | |
Pumo2g00193 | 957 | SUPERFAMILY | L domain-like | 30 | 298 | - | - | |
Pumo2g00193 | 957 | SMART | serkin_6 | 636 | 909 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo2g00193 | 957 | Pfam | Protein kinase domain | 637 | 903 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo2g00193 | 957 | SUPERFAMILY | L domain-like | 258 | 376 | - | - | |
Pumo2g00193 | 957 | ProSiteProfiles | Protein kinase domain profile. | 636 | 909 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo2g00193 | 957 | Gene3D | Phosphorylase Kinase; domain 1 | 607 | 711 | - | - | |
Pumo2g00193 | 957 | MobiDBLite | consensus disorder prediction | 598 | 617 | - | - | |
Pumo2g00193 | 957 | PANTHER | RECEPTOR-LIKE PROTEIN 55 | 36 | 907 | - | - | |
Pumo2g00193 | 957 | Gene3D | Transferase(Phosphotransferase) domain 1 | 712 | 917 | - | - | |
Pumo2g00193 | 957 | SUPERFAMILY | Protein kinase-like (PK-like) | 622 | 930 | IPR011009 | - | |
Pumo2g00193 | 957 | MobiDBLite | consensus disorder prediction | 593 | 617 | - | - | |
Pumo2g00193 | 957 | FunFam | Leucine-rich repeat protein kinase family protein | 601 | 711 | - | - | |
Pumo2g00193 | 957 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 756 | 768 | IPR008271 | GO:0004672|GO:0006468 | |
Pumo2g00193 | 957 | ProSitePatterns | Protein kinases ATP-binding region signature. | 642 | 664 | IPR017441 | GO:0005524 | |
Pumo2g00193 | 957 | Gene3D | Ribonuclease Inhibitor | 19 | 181 | IPR032675 | - | |
Pumo2g00193 | 957 | Gene3D | Ribonuclease Inhibitor | 182 | 278 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo2g00193 | Pumo-Chr2 | 3935468 | 3943879 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo2g00193 | 7 | 957 | Receptor kinase-like Gene Family | AT5G49760 | 57.128 | 0.0 | 1033 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VIII-1 | Pumo2g00193 | Pkinase | 1.5e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo2g00193 | - | - | gmx:100782366 | 1640.17 |