Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00192 ATGATCATGGGTGAAAGAATACTGATACTACTAGTGCTTTCCTTCAACTGTTTGTTGTTTGCAGTAGCACAAGATGTCAACAATGATTTTGTAGTCCTAAAGTCTCTAAGGGGTTCTTGGCAAGGCCCAACTCCCAACTGGGAGGGTTCAGATCCTTGCAAGGATTGGGATGGCATTAAGTGCCAAAACTCATCACGTGTTATTTCCATATCATTAACAGATATTGGTTTGACCGGCCAACTTTCAGGAGATATTGGATCACTTTCTGAACTGGAGATTCTGGATCTCTCATACAATAGGGGCCTCACAGGATCACTTCCAACAGAAATTGGAAACTTGAAGAAGCTATCAAAATTAATTCTTGTTGGTTGTGGTTTTACTGGTCGTATTCCAGATGAAATAGGATCTCTACAACAGCTTGGTTTCTTATCTTTAAACTCCAACAATTTTGTTGGACCAATTCCACCTTCTATTGGCAATCTATCAAATCTTACTTGGCTAGATTTAACTGACAATCAGCTTGATGAATCCATCCCAGTATCTAGTGGCACTACCCCTGGTCTTGATATGTTGCACAAAGCACTGCACTTTCATCTTGGGAAGAATAGGCTTTCAGGAGAAATTCCTCCTCAACTTTTTAGCTCGAAAATGACTCTGATACATGTGATTTTTTACAGCAATCAACTAGTTGGCAGCATTCCTGAAACGCTTGGGCTAGTTAAGAGTCTGACGGTGGTGCGCTTTGAAAACAATTCATTGGATGGACATGTGCCTCAGAGCCTCAACAACCTTACCAGTGTCACAGACCTGTTGTTGTCCAACAATAAGCTGCAAGGTGCCCTGCCAAACCTTACTGGGATGAACTCCCTAGAATACTTGGATTTGAGCAACAATAGCTTTGATAAGTCAAATTTTCCACTGTGGCTTTCAAATCTGAAGAATTTAACAACATTACAAATGGAGAATGTGAACCTTAATGGAAACATTCCGGTTCCTTTATTTAGCCTTGCCAATTTACAAAATGTTGTGCTAAAAAGCAACTACCTTGATGGAACCTTGGATATTGGCACCAACTACAGCAAACAACTGAAACTTATTGATTTGAAGTCAAATTCAATTGAGGACTTTGAGCAACAAAATGATCACCTGGAGGGTATCACGATAACACTCGAGTCCAACCCCATTTGTACAGAAACAGGAGCTATGGAGAGGAGTTACTGCAAAAAACACAATATCTTAGATACAGAACCACAAAATAAATGTCCACGTGTTAGTTGCAGTCCAGATCAGATTCTCAGTCCCAATTGCAAATGTGGATATCCAATTACAGGAACTTTGACTTTCAGAGCACCTTCATATTTTGAATGGAGAAATACAACATCCCTGGAGGAAGATCTTTTGCAAGCATTTCAATCTAATCATCTACCTGTGGATTCAGTTTCTTTAGTCTTTTCAACTGGAGATCCATTTCAAAGTTTTGACTTTACCGTACAAATATTCCCACTAGGCCAAGATCATTTCAGCCAACAAGACAAATCTAGAATAAGCTCTTTTCTTGGCAACCTAAGTGCTAATAGACCATATAATTTTATTGCAGGAAACCAAAGTGATGGCCATAAGGAGTCAAGTAATTCATCAAGCCCTGTCATAATTATTGGAGCAGCAGTTGGTGCTTCTTCCGTTCTGCTTGTGTTATTAGTCCTTGCAGGTCTTTATGCTTTCCGCCAGAAGAGAAGAGCAGAAAGAGCAATTTCTCGAAGCAATCCTTTTGGAAACTGGGATCCAACTAAAAGCAACTGTGGCACCCCTCAGTTAAAAGCAGCAAGGCAATTCTCTTTTAAAGAAATTAAGAAATACACAAACAACTTCTCACAAGACAATGATATTGGATCAGGAGGTTATGGAAAGGTTTATCGGGGAACTCTTCCCAGTGGGCAAGTGGTAGCCATAAAACGAGCACAAAAAGAATCAAAGCAGGGAAGGCTAGAATTCAAAGCTGAAATTGAACTCCTTTCAAGGGTCCACCACAAGAATCTGGTTAGCCTTTTGGGATTCTGCTTTGAACGAGAAGAACAAATGCTGGTTTATGAGTTTGTTCCAAATGGAACTTTGAAAGATGCTCTCACAGGGAAATCTGGAATTGTGTTGAGCTGGAGTAGAAGGCTGAAAGTAGCCCTTGGTGCTGCCAGGGGTTTGGCTTATCTTCATGAACATGCTGATCCCCCTATTATACACAGGGACATCAAATCAAACAACATTTTACTGGATAAGAACTATACTGCAAAAGTTGCTGATTTTGGTCTCTCCAAGTCTATCTTAGATGATGAAAAAGATCACGTCACCACTCAAGTTAAAGGAACAATGGGCTACTTGGATCCAGATTATTATACTAGTCAGCAGTTGACTGAAAAGAGTGATGTCTATAGTTTTGGAGTGCTAATGCTGGAGCTGATTACTGCAAGAAAGCCAATAGAACGAGGGAAATACATTGTGAAAGTGGTCAGGAGTACAATAGATAAGACAAAAGACTTGTATGGTCTTCTCGAAATTATTGACCCAGCCATCTGTTCAGGATCAACACTGGAGGGTTTTGAGAAGTTTGTGGACCTTGCAATGGAGTGTGTTGAAGATTCAGGAGTTGACAGGCCCGCAATGAGTGATGTGGTTAAAGAAATTGAAGACATGTTGCGGTCTGTTGGTTTGCACCTAACATCTGAATCATTAGCATCCACTACATCTAGTTATAGATATCAGGAGGTAAGTATAGTGAGTTCCCATCAGGACCATCCTTACAGCAATGAGTCCTTTGGTTCAAGTGCAGAACATTTATATTCAAAAAATGAGCCTAGTTAA 2853 0.4017 MIMGERILILLVLSFNCLLFAVAQDVNNDFVVLKSLRGSWQGPTPNWEGSDPCKDWDGIKCQNSSRVISISLTDIGLTGQLSGDIGSLSELEILDLSYNRGLTGSLPTEIGNLKKLSKLILVGCGFTGRIPDEIGSLQQLGFLSLNSNNFVGPIPPSIGNLSNLTWLDLTDNQLDESIPVSSGTTPGLDMLHKALHFHLGKNRLSGEIPPQLFSSKMTLIHVIFYSNQLVGSIPETLGLVKSLTVVRFENNSLDGHVPQSLNNLTSVTDLLLSNNKLQGALPNLTGMNSLEYLDLSNNSFDKSNFPLWLSNLKNLTTLQMENVNLNGNIPVPLFSLANLQNVVLKSNYLDGTLDIGTNYSKQLKLIDLKSNSIEDFEQQNDHLEGITITLESNPICTETGAMERSYCKKHNILDTEPQNKCPRVSCSPDQILSPNCKCGYPITGTLTFRAPSYFEWRNTTSLEEDLLQAFQSNHLPVDSVSLVFSTGDPFQSFDFTVQIFPLGQDHFSQQDKSRISSFLGNLSANRPYNFIAGNQSDGHKESSNSSSPVIIIGAAVGASSVLLVLLVLAGLYAFRQKRRAERAISRSNPFGNWDPTKSNCGTPQLKAARQFSFKEIKKYTNNFSQDNDIGSGGYGKVYRGTLPSGQVVAIKRAQKESKQGRLEFKAEIELLSRVHHKNLVSLLGFCFEREEQMLVYEFVPNGTLKDALTGKSGIVLSWSRRLKVALGAARGLAYLHEHADPPIIHRDIKSNNILLDKNYTAKVADFGLSKSILDDEKDHVTTQVKGTMGYLDPDYYTSQQLTEKSDVYSFGVLMLELITARKPIERGKYIVKVVRSTIDKTKDLYGLLEIIDPAICSGSTLEGFEKFVDLAMECVEDSGVDRPAMSDVVKEIEDMLRSVGLHLTSESLASTTSSYRYQEVSIVSSHQDHPYSNESFGSSAEHLYSKNEPS 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00192 950 ProSiteProfiles Protein kinase domain profile. 623 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00192 950 FunFam Leucine-rich repeat protein kinase family protein 184 283 - -
Pumo2g00192 950 ProSitePatterns Serine/Threonine protein kinases active-site signature. 743 755 IPR008271 GO:0004672|GO:0006468
Pumo2g00192 950 FunFam Leucine-rich repeat family protein 28 183 - -
Pumo2g00192 950 CDD STKc_IRAK 629 895 - -
Pumo2g00192 950 MobiDBLite consensus disorder prediction 926 950 - -
Pumo2g00192 950 ProSitePatterns Protein kinases ATP-binding region signature. 629 651 IPR017441 GO:0005524
Pumo2g00192 950 Gene3D Ribonuclease Inhibitor 189 398 IPR032675 -
Pumo2g00192 950 Gene3D Transferase(Phosphotransferase) domain 1 699 910 - -
Pumo2g00192 950 Gene3D Phosphorylase Kinase; domain 1 595 698 - -
Pumo2g00192 950 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 699 908 - -
Pumo2g00192 950 Gene3D Ribonuclease Inhibitor 19 185 IPR032675 -
Pumo2g00192 950 SUPERFAMILY L domain-like 46 419 - -
Pumo2g00192 950 SMART serkin_6 623 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00192 950 SUPERFAMILY Protein kinase-like (PK-like) 609 914 IPR011009 -
Pumo2g00192 950 Pfam Protein tyrosine and serine/threonine kinase 625 890 IPR001245 GO:0004672|GO:0006468
Pumo2g00192 950 FunFam Leucine-rich repeat protein kinase family protein 592 698 - -
Pumo2g00192 950 PANTHER RECEPTOR-LIKE PROTEIN 55 38 895 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00192 Pumo-Chr2 3923370 3930149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00192 4 949 Receptor kinase-like Gene Family AT5G49760 52.648 0.0 892
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pumo2g00192 PK_Tyr_Ser-Thr 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00192 - - gmx:100810323 1598.95