Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo2g00192 | ATGATCATGGGTGAAAGAATACTGATACTACTAGTGCTTTCCTTCAACTGTTTGTTGTTTGCAGTAGCACAAGATGTCAACAATGATTTTGTAGTCCTAAAGTCTCTAAGGGGTTCTTGGCAAGGCCCAACTCCCAACTGGGAGGGTTCAGATCCTTGCAAGGATTGGGATGGCATTAAGTGCCAAAACTCATCACGTGTTATTTCCATATCATTAACAGATATTGGTTTGACCGGCCAACTTTCAGGAGATATTGGATCACTTTCTGAACTGGAGATTCTGGATCTCTCATACAATAGGGGCCTCACAGGATCACTTCCAACAGAAATTGGAAACTTGAAGAAGCTATCAAAATTAATTCTTGTTGGTTGTGGTTTTACTGGTCGTATTCCAGATGAAATAGGATCTCTACAACAGCTTGGTTTCTTATCTTTAAACTCCAACAATTTTGTTGGACCAATTCCACCTTCTATTGGCAATCTATCAAATCTTACTTGGCTAGATTTAACTGACAATCAGCTTGATGAATCCATCCCAGTATCTAGTGGCACTACCCCTGGTCTTGATATGTTGCACAAAGCACTGCACTTTCATCTTGGGAAGAATAGGCTTTCAGGAGAAATTCCTCCTCAACTTTTTAGCTCGAAAATGACTCTGATACATGTGATTTTTTACAGCAATCAACTAGTTGGCAGCATTCCTGAAACGCTTGGGCTAGTTAAGAGTCTGACGGTGGTGCGCTTTGAAAACAATTCATTGGATGGACATGTGCCTCAGAGCCTCAACAACCTTACCAGTGTCACAGACCTGTTGTTGTCCAACAATAAGCTGCAAGGTGCCCTGCCAAACCTTACTGGGATGAACTCCCTAGAATACTTGGATTTGAGCAACAATAGCTTTGATAAGTCAAATTTTCCACTGTGGCTTTCAAATCTGAAGAATTTAACAACATTACAAATGGAGAATGTGAACCTTAATGGAAACATTCCGGTTCCTTTATTTAGCCTTGCCAATTTACAAAATGTTGTGCTAAAAAGCAACTACCTTGATGGAACCTTGGATATTGGCACCAACTACAGCAAACAACTGAAACTTATTGATTTGAAGTCAAATTCAATTGAGGACTTTGAGCAACAAAATGATCACCTGGAGGGTATCACGATAACACTCGAGTCCAACCCCATTTGTACAGAAACAGGAGCTATGGAGAGGAGTTACTGCAAAAAACACAATATCTTAGATACAGAACCACAAAATAAATGTCCACGTGTTAGTTGCAGTCCAGATCAGATTCTCAGTCCCAATTGCAAATGTGGATATCCAATTACAGGAACTTTGACTTTCAGAGCACCTTCATATTTTGAATGGAGAAATACAACATCCCTGGAGGAAGATCTTTTGCAAGCATTTCAATCTAATCATCTACCTGTGGATTCAGTTTCTTTAGTCTTTTCAACTGGAGATCCATTTCAAAGTTTTGACTTTACCGTACAAATATTCCCACTAGGCCAAGATCATTTCAGCCAACAAGACAAATCTAGAATAAGCTCTTTTCTTGGCAACCTAAGTGCTAATAGACCATATAATTTTATTGCAGGAAACCAAAGTGATGGCCATAAGGAGTCAAGTAATTCATCAAGCCCTGTCATAATTATTGGAGCAGCAGTTGGTGCTTCTTCCGTTCTGCTTGTGTTATTAGTCCTTGCAGGTCTTTATGCTTTCCGCCAGAAGAGAAGAGCAGAAAGAGCAATTTCTCGAAGCAATCCTTTTGGAAACTGGGATCCAACTAAAAGCAACTGTGGCACCCCTCAGTTAAAAGCAGCAAGGCAATTCTCTTTTAAAGAAATTAAGAAATACACAAACAACTTCTCACAAGACAATGATATTGGATCAGGAGGTTATGGAAAGGTTTATCGGGGAACTCTTCCCAGTGGGCAAGTGGTAGCCATAAAACGAGCACAAAAAGAATCAAAGCAGGGAAGGCTAGAATTCAAAGCTGAAATTGAACTCCTTTCAAGGGTCCACCACAAGAATCTGGTTAGCCTTTTGGGATTCTGCTTTGAACGAGAAGAACAAATGCTGGTTTATGAGTTTGTTCCAAATGGAACTTTGAAAGATGCTCTCACAGGGAAATCTGGAATTGTGTTGAGCTGGAGTAGAAGGCTGAAAGTAGCCCTTGGTGCTGCCAGGGGTTTGGCTTATCTTCATGAACATGCTGATCCCCCTATTATACACAGGGACATCAAATCAAACAACATTTTACTGGATAAGAACTATACTGCAAAAGTTGCTGATTTTGGTCTCTCCAAGTCTATCTTAGATGATGAAAAAGATCACGTCACCACTCAAGTTAAAGGAACAATGGGCTACTTGGATCCAGATTATTATACTAGTCAGCAGTTGACTGAAAAGAGTGATGTCTATAGTTTTGGAGTGCTAATGCTGGAGCTGATTACTGCAAGAAAGCCAATAGAACGAGGGAAATACATTGTGAAAGTGGTCAGGAGTACAATAGATAAGACAAAAGACTTGTATGGTCTTCTCGAAATTATTGACCCAGCCATCTGTTCAGGATCAACACTGGAGGGTTTTGAGAAGTTTGTGGACCTTGCAATGGAGTGTGTTGAAGATTCAGGAGTTGACAGGCCCGCAATGAGTGATGTGGTTAAAGAAATTGAAGACATGTTGCGGTCTGTTGGTTTGCACCTAACATCTGAATCATTAGCATCCACTACATCTAGTTATAGATATCAGGAGGTAAGTATAGTGAGTTCCCATCAGGACCATCCTTACAGCAATGAGTCCTTTGGTTCAAGTGCAGAACATTTATATTCAAAAAATGAGCCTAGTTAA | 2853 | 0.4017 | MIMGERILILLVLSFNCLLFAVAQDVNNDFVVLKSLRGSWQGPTPNWEGSDPCKDWDGIKCQNSSRVISISLTDIGLTGQLSGDIGSLSELEILDLSYNRGLTGSLPTEIGNLKKLSKLILVGCGFTGRIPDEIGSLQQLGFLSLNSNNFVGPIPPSIGNLSNLTWLDLTDNQLDESIPVSSGTTPGLDMLHKALHFHLGKNRLSGEIPPQLFSSKMTLIHVIFYSNQLVGSIPETLGLVKSLTVVRFENNSLDGHVPQSLNNLTSVTDLLLSNNKLQGALPNLTGMNSLEYLDLSNNSFDKSNFPLWLSNLKNLTTLQMENVNLNGNIPVPLFSLANLQNVVLKSNYLDGTLDIGTNYSKQLKLIDLKSNSIEDFEQQNDHLEGITITLESNPICTETGAMERSYCKKHNILDTEPQNKCPRVSCSPDQILSPNCKCGYPITGTLTFRAPSYFEWRNTTSLEEDLLQAFQSNHLPVDSVSLVFSTGDPFQSFDFTVQIFPLGQDHFSQQDKSRISSFLGNLSANRPYNFIAGNQSDGHKESSNSSSPVIIIGAAVGASSVLLVLLVLAGLYAFRQKRRAERAISRSNPFGNWDPTKSNCGTPQLKAARQFSFKEIKKYTNNFSQDNDIGSGGYGKVYRGTLPSGQVVAIKRAQKESKQGRLEFKAEIELLSRVHHKNLVSLLGFCFEREEQMLVYEFVPNGTLKDALTGKSGIVLSWSRRLKVALGAARGLAYLHEHADPPIIHRDIKSNNILLDKNYTAKVADFGLSKSILDDEKDHVTTQVKGTMGYLDPDYYTSQQLTEKSDVYSFGVLMLELITARKPIERGKYIVKVVRSTIDKTKDLYGLLEIIDPAICSGSTLEGFEKFVDLAMECVEDSGVDRPAMSDVVKEIEDMLRSVGLHLTSESLASTTSSYRYQEVSIVSSHQDHPYSNESFGSSAEHLYSKNEPS | 950 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo2g00192 | 950 | ProSiteProfiles | Protein kinase domain profile. | 623 | 896 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo2g00192 | 950 | FunFam | Leucine-rich repeat protein kinase family protein | 184 | 283 | - | - | |
Pumo2g00192 | 950 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 743 | 755 | IPR008271 | GO:0004672|GO:0006468 | |
Pumo2g00192 | 950 | FunFam | Leucine-rich repeat family protein | 28 | 183 | - | - | |
Pumo2g00192 | 950 | CDD | STKc_IRAK | 629 | 895 | - | - | |
Pumo2g00192 | 950 | MobiDBLite | consensus disorder prediction | 926 | 950 | - | - | |
Pumo2g00192 | 950 | ProSitePatterns | Protein kinases ATP-binding region signature. | 629 | 651 | IPR017441 | GO:0005524 | |
Pumo2g00192 | 950 | Gene3D | Ribonuclease Inhibitor | 189 | 398 | IPR032675 | - | |
Pumo2g00192 | 950 | Gene3D | Transferase(Phosphotransferase) domain 1 | 699 | 910 | - | - | |
Pumo2g00192 | 950 | Gene3D | Phosphorylase Kinase; domain 1 | 595 | 698 | - | - | |
Pumo2g00192 | 950 | FunFam | LRR receptor-like serine/threonine-protein kinase HSL2 | 699 | 908 | - | - | |
Pumo2g00192 | 950 | Gene3D | Ribonuclease Inhibitor | 19 | 185 | IPR032675 | - | |
Pumo2g00192 | 950 | SUPERFAMILY | L domain-like | 46 | 419 | - | - | |
Pumo2g00192 | 950 | SMART | serkin_6 | 623 | 896 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo2g00192 | 950 | SUPERFAMILY | Protein kinase-like (PK-like) | 609 | 914 | IPR011009 | - | |
Pumo2g00192 | 950 | Pfam | Protein tyrosine and serine/threonine kinase | 625 | 890 | IPR001245 | GO:0004672|GO:0006468 | |
Pumo2g00192 | 950 | FunFam | Leucine-rich repeat protein kinase family protein | 592 | 698 | - | - | |
Pumo2g00192 | 950 | PANTHER | RECEPTOR-LIKE PROTEIN 55 | 38 | 895 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo2g00192 | Pumo-Chr2 | 3923370 | 3930149 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo2g00192 | 4 | 949 | Receptor kinase-like Gene Family | AT5G49760 | 52.648 | 0.0 | 892 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VIII-1 | Pumo2g00192 | PK_Tyr_Ser-Thr | 1.9e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo2g00192 | - | - | gmx:100810323 | 1598.95 |