Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00189 ATGTCCATGGCTAACGAAAACCCTCACGACGAGGTTGTGTGCGTAACCGGCGCCAACGGTTTCATCGGTTCGTGGCTGGTCCGAACCCTCTTGGAGAAGGAGAATCCACGCTACACCATCCACGCCACCATCTTCCCCGGCTCCGACCCCTCCCACCTCTTCAACCTCCACCCCGCCGCCGCCGCCCGCCTCGCCGTCTTCCCCGCCGACCTCATGGACGCCGCCGCCCTCTCCCGCGCCATCTCCGGCTGCTCCGGCGTGTTCCACGTGGCCTCCCCCTGCACGCTCGAGGACCCCACGGACCCGCAAAGGGAGCTTCTCCAACCCGCAGTGCAGGGCACTCTGAACGTTTTAACGGCAGCAAAGCGCGTGGGCGTGCGGCGCGTGGTGCTCACGTCCTCGATCTCCGCGATGGTGCCGAACCCGGGGTGGCCGGCGGGAAGGGCCGCGGACGAGGCGTCGTGGACGGACGTGGAGTACTGCAAGGGGAAGGGGGAAGTGGTACCCGGTGGCGAAGACGGAGGCGGAGAGGGCGGCGTGGGCGTTCGACGGCGGCGTCGACGTGGTGGTGGTTCTGCCGGCGACGTGCCTGGGGCAGCTGCTGCAGCCGGAGCTGAACGCGAGCTCCGCCGTGCTGCAGAGGCTGATGATGGGGTCGAGGGAGACTCAGGAGTATCACTGGTTGGGTGCGGTGCATGTGAAGGACGTTGCTAA 714 0.6737 MSMANENPHDEVVCVTGANGFIGSWLVRTLLEKENPRYTIHATIFPGSDPSHLFNLHPAAAARLAVFPADLMDAAALSRAISGCSGVFHVASPCTLEDPTDPQRELLQPAVQGTLNVLTAAKRVGVRRVVLTSSISAMVPNPGWPAGRAADEASWTDVEYCKGKGEVVPGGEDGGGEGGVGVRRRRRRGGGSAGDVPGAAAAAGAERELRRAAEADDGVEGDSGVSLVGCGACEGRC 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00189 237 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 11 162 - -
Pumo2g00189 237 MobiDBLite consensus disorder prediction 164 224 - -
Pumo2g00189 237 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 163 IPR036291 -
Pumo2g00189 237 Gene3D - 3 169 - -
Pumo2g00189 237 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 15 148 IPR002225 GO:0003854|GO:0006694|GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00189 Pumo-Chr2 3916154 3916867 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00189 11 169 Monolignol Biosynthesis Gene Families AT2G02400 61.006 4.67e-70 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00189 - - gmx:100795399 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00189 2 3916154 3916867 Pumo2g00189 2 3916154 3916867 ECH