Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00154 ATGCGTGTAGTAGTAGTGGCAGTGTGGTGTGCAATATTAGTGATGCATGGAGGGTTTTCAGTGTCTTATGGTGATGAGCTGAGTTCTACGTACTACAGCGAAACATGTCCACTGCTATACTATGTTGTTTATGGAGTCATCTACACTGCTTCCCTCACCGATCCTCGCATTGGTGCAAGCCTTCTCAGGCTTCATTTTCATGATTGCTTTGTTCAAGGTTGTGATGGATCAATTTTGCTGAACAACACTGCTACAATAGAAAGCGAACAAGATGCACTTCCAAATAACAACTCAATAAGGGGGTTGGACGTGGTCAATAACATCAAGACAGCGGTGGAATATGTTTGTCCTGCCACAGTTTCTTGTGCTGATATTCTAGCTATTGCAGCTGAAGTAGCTTGTGAGCTGGGAGGAGGTCCATCATGGTCAGTTCTATTAGGAAGAAGGGATAGCTTAACAGCAAACAGAACCCTTGCAAATCTAAACCTTCCAGCAGCCTCTGCCACACTGGATGAACTTAAAGAGTCCTTTGATGCTCAAGGTCTCAACACCACTGATTTAGTTACACTCTCAGGGTTTTCAGTCTCTTATGCTCAGCTCACTCCTACGTTCTACATCGGAACATGTCCACAGCTATTCCCTATTGTGTTTGGAGTCATCTTCGAAGCTTCCATCACCGATCCCCGAATCGGGGCCAGCCTCATGAGGCTTCATTTTCATGATTGCTTTGTTCAAGGTTGTGATGGATCAGTTTTGCTGAACAACACTGCTACCATTGAAAGCGAGCAAGATGCGCTTCCAAATATCAACTCAATAAGGGGCTTGGACGTTGTCAATAACATCAAGACAGCAGTGGAAAATAGTTGTCCAGACACAGTTTCTTGTGCTGATATTCTTGCTATTGCAGCAGAAGTAGCTTCTGTTCTGGGAGGAGGTCCAGGATGGTCAGTTCCATTAGGAAGAAGGGATAGTTTAACAGCAAACCGAACCCTTGCAAATCAAAACCTTCCAGCACCCTTCTTCACATTGGATCAACTCAAAGCTTCCTTTGCTGTTCAAGGTCTCAACACCCTTGATTTAGTTACACTCTCAGGGTTTCAAGTATCTTATTCTCAGCTCAGTCCTACGTTCTACATCGGAACATGTCCAAATCTATTCAATATTGTGTTTGGAGTCATCTTCGATGCTTCCCTCACCGATCCCCGAATCGGGGCCAGCCTCATGAGACTTCATTTTCATGATTGCTTTGTTCAAGGTTGTGATGGATCAGTTTTGCTGAACAACACTGCTACCATTGAAAGCGAGCAAGATGCAATTCCAAATAACAACTCATTAAGGGGTTTGGACGTGGTCAATAACATCAAGACAGCGGTGGAAAATAGTTGTCCAGACACAGTTTCTTGTGCTGATATTCTTGCTATTGCAGCTGAAGTAGCTTCTGTTCTGGGAGGAGGTCCAGCATGGGCAGTTCCATTAGGAAGGAGGGATAGTTTAACAGCAAACCGAACCCTTGCAAATCAAAACCTTCCAGCTCCTTTCTTCAACCTCACTCAACTTAAAGCTGCCTTTGCTGTTCAAGGTCTCAACACCACTGATTTAGTTGCACTCTCAGGCAGTCTAAAATTTAGTTTTGGTTAG 1638 0.4414 MRVVVVAVWCAILVMHGGFSVSYGDELSSTYYSETCPLLYYVVYGVIYTASLTDPRIGASLLRLHFHDCFVQGCDGSILLNNTATIESEQDALPNNNSIRGLDVVNNIKTAVEYVCPATVSCADILAIAAEVACELGGGPSWSVLLGRRDSLTANRTLANLNLPAASATLDELKESFDAQGLNTTDLVTLSGFSVSYAQLTPTFYIGTCPQLFPIVFGVIFEASITDPRIGASLMRLHFHDCFVQGCDGSVLLNNTATIESEQDALPNINSIRGLDVVNNIKTAVENSCPDTVSCADILAIAAEVASVLGGGPGWSVPLGRRDSLTANRTLANQNLPAPFFTLDQLKASFAVQGLNTLDLVTLSGFQVSYSQLSPTFYIGTCPNLFNIVFGVIFDASLTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTATIESEQDAIPNNNSLRGLDVVNNIKTAVENSCPDTVSCADILAIAAEVASVLGGGPAWAVPLGRRDSLTANRTLANQNLPAPFFNLTQLKAAFAVQGLNTTDLVALSGSLKFSFG 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00154 545 Gene3D Peroxidase, domain 2 164 192 - -
Pumo2g00154 545 Gene3D Peroxidase, domain 2 510 539 - -
Pumo2g00154 545 Gene3D - 30 163 - -
Pumo2g00154 545 Gene3D - 377 509 - -
Pumo2g00154 545 Pfam Peroxidase 226 366 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo2g00154 545 Pfam Peroxidase 49 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo2g00154 545 Pfam Peroxidase 397 539 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo2g00154 545 PRINTS Plant peroxidase signature 484 499 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo2g00154 545 PRINTS Plant peroxidase signature 382 401 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo2g00154 545 PRINTS Plant peroxidase signature 531 543 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo2g00154 545 PRINTS Plant peroxidase signature 465 475 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo2g00154 545 PRINTS Plant peroxidase signature 406 426 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo2g00154 545 PRINTS Plant peroxidase signature 446 459 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo2g00154 545 PRINTS Haem peroxidase superfamily signature 532 545 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo2g00154 545 PRINTS Haem peroxidase superfamily signature 484 496 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo2g00154 545 PRINTS Haem peroxidase superfamily signature 404 418 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo2g00154 545 PRINTS Haem peroxidase superfamily signature 466 483 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo2g00154 545 SUPERFAMILY Heme-dependent peroxidases 372 539 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo2g00154 545 FunFam Peroxidase 30 176 - -
Pumo2g00154 545 Gene3D - 204 336 - -
Pumo2g00154 545 ProSiteProfiles Plant heme peroxidase family profile. 416 545 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo2g00154 545 FunFam Peroxidase 376 520 - -
Pumo2g00154 545 PANTHER PEROXIDASE 72-RELATED 371 541 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo2g00154 545 SUPERFAMILY Heme-dependent peroxidases 199 365 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo2g00154 545 ProSitePatterns Peroxidases active site signature. 231 242 IPR019794 GO:0004601
Pumo2g00154 545 ProSitePatterns Peroxidases active site signature. 404 415 IPR019794 GO:0004601
Pumo2g00154 545 ProSiteProfiles Plant heme peroxidase family profile. 26 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo2g00154 545 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Pumo2g00154 545 SUPERFAMILY Heme-dependent peroxidases 27 192 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo2g00154 545 ProSiteProfiles Plant heme peroxidase family profile. 199 415 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo2g00154 545 Gene3D Peroxidase, domain 2 337 366 - -
Pumo2g00154 545 FunFam Peroxidase 203 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00154 Pumo-Chr2 3463664 3478801 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00154 369 542 Peroxidase AT2G38380 60.000 1.49e-66 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00154 K00430 - gsj:114367725 426.017