Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00153 ATGGGGTCTTTCCATGTCACAGTGACAGCTCTGTGCTGTGCAGTGGTTGTGCTTGGAGTGCTTCCACTCTCCTTAGATGCACAACTAGATCCCTCGTTTTACAGAAACACTTGTCCCAAGGTTCACTCCATTGTTCGTGAAGTCGTGAGGAGCGTTTCAAAGAAAGATCCCCGCATGCTTGCCAGTCTCATTAGACTTCACTTTCATGACTGCTTTGTTCAAGGCTGTGACGCATCAGTTTTGTTGAACAACACTGCCACCATAGAGAGTGAGCAACAGGCTCTGCCAAACAACAACTCACTAAGAGGTTTGGATGTTGTGAACGACATCAAGACAGCAGTAGAAAAGGAATGCCCCGGCGTGGTTTCTTGTGCTGATATTCTTACCCTTGCATCTGAAATATCTTCTGTTCTGGGTGGTGGTCCTGATTGGAAAGTTCCCTTGGGAAGAAGGGATAGTTTAACAGCAAACCGAGCCCTGGCCAATCAAAACCTTCCTTCTCCTTTCTCCAACCTCACTGTACTTAAAAAGGCATTTGATGTTCAAGGTCTTGACACTACTGATCTAGTAGCACTCTCAGTAGCATTATCAGAGCTATTTAATCTTTCCTCTCGTCTCTATTTCCAAGTTGGTATTAGAGCTCTTAGGAGATCTGGATCTGATTTCGCATTCAAACCCTTAGAAGTGCAAATCACTGGTAGCATTATCAGCATCGTCCATTGTCGATGTCGTCGTGCCATTGACATACTGACAGATGATGAGTGA 765 0.451 MGSFHVTVTALCCAVVVLGVLPLSLDAQLDPSFYRNTCPKVHSIVREVVRSVSKKDPRMLASLIRLHFHDCFVQGCDASVLLNNTATIESEQQALPNNNSLRGLDVVNDIKTAVEKECPGVVSCADILTLASEISSVLGGGPDWKVPLGRRDSLTANRALANQNLPSPFSNLTVLKKAFDVQGLDTTDLVALSVALSELFNLSSRLYFQVGIRALRRSGSDFAFKPLEVQITGSIISIVHCRCRRAIDILTDDE 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00153 254 PANTHER PEROXIDASE 72-RELATED 25 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo2g00153 254 Pfam Peroxidase 45 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo2g00153 254 ProSiteProfiles Plant heme peroxidase family profile. 28 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo2g00153 254 SUPERFAMILY Heme-dependent peroxidases 28 195 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo2g00153 254 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo2g00153 254 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo2g00153 254 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo2g00153 254 Gene3D - 32 165 - -
Pumo2g00153 254 FunFam Peroxidase 32 178 - -
Pumo2g00153 254 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo2g00153 254 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo2g00153 254 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo2g00153 254 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo2g00153 254 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo2g00153 254 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo2g00153 254 Gene3D Peroxidase, domain 2 166 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00153 Pumo-Chr2 3446904 3451275 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00153 15 195 Peroxidase AT5G06720 55.249 9.19e-66 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00153 K00430 - gmx:547499 342.813