Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00138 ATGGCTAACTATTCCCACCCTCATATCTGCCAATGTCTGAGTCGCTTGCTGGCCTTCCGGGGACATTTTCCGGTCACTATTGCCGGAAACCGCCGCAAAACTGGCCAAGAGTTTGTAGAGGAAGTGTTGTCCTTGGCACAAGGCCTGCTCCACCTTGGACTCACACCTGGTCATGTTGTTGCCATCTCTGCTTACAATAGTGATAGGTATCTGGAGTGGTTATTAGCCATTGCATTTGTTGGAGGAATAGCTGCTCCTCTGAACTATCGCTGGAGTTTTGAAGAGGCAAGATTAGCAATGGCTGCAGTGAAGCCAGTGTTGTTAGTGATTGATGAGAGCAGTTACACATGGTACTCAAAACTCCAGCAAAATGACGTTCCATCTCTGAAGTGGCATATTTTGTTGGATTCCCCTTCCTCAGATTTTACTAAGTGGAATGTGTTAACTCCAGAAATGCTTAAGAGGCATCCTGTAAAACTTCTACCATTTGATTACTCCTGGGCACCTGAAGGCGCTGTCATAATATGCTTTACTTCAGGAACTACGGGAAAGCCTAAGGGAGTCACCCTGAGTCATGGAGCTTTGATCATACAATCCTTAGCCAAGATTGCCATAGTGGGCTACAACGAGGATGATGTCTATCTGCATACTGCTCCATTATGCCATATTGGTGGCTTGTCATCAGCCTTGACCATGCTTATGGCTGGAGGTTGCCATGTCTTGATGCCAAAGTTTGATGCAGAATCAGCTGTTGATGCCATACAGCAACATGCAGTGACATCTTTTATCACTGTTCCTGCAATAATGTCCAGTCTGATTTCTATAATTAGGCACAAAGAGACCTGGAAAGGAGGAGAAACTGTCAAGAAAATACTTAATGGGGGTGGAAGCCTCTCACTTGAGCTCATCAAGGACACTAGCATATTCTTCCACAAAGCTAAACTTATTTCAGCTTATGGAATGACAGAGACATGCTCTTCATTGACATTCCTGACACTCTATGACCCAATGCATGAAACAACAAACCAGTCCCTTCAAGCATTTGGTGTGGCAGGATCTAAGTTTATTCACCAGCCACAAGGTGTTTGTGTTGGCAAGGCTGCACCCCATATAGAAATGAAGATAAGTGCAGATGCTTCTGGTCACATTGGGAGGATTCTAACTAGAGGACCACATATAATGCTCAGGTATTGGGACCAAACTCACACAAATCCATTAAATCCGAATAATGAAGCCTGGCTTGACACAGGTGACATTGGATCAATTGATCATTATGGTAATTTGTGGCTCCTTGGTCGAACAAATGGTCGAATCAAGAGTGGTGGGGAGAACATTTACCCTGAAGAGGTTGAGGCAATTCTACTACAACATCCAGGGATTGCAAGTGTTGTTGTTGTGGGAATCCCAGATGCTCACCTGACTGAGATGGTAGCAGCATGTATCCATCTAAAAGAAAATTGGCAATGGTCAGAGCAGTCTGCTTCAAATGAAGAGTTTCACCTATCTAGAAAGAATCTCCAGCAATATTGTATAGAAAATCATTTAAGCAGGTTTAAGATACCAAAAATGTTTATTGTATGGAGGAAGCCATTTCCACTCACTACAACAGGGAAAATAAAAAGAGATCAAGTCAGAAAGGAAGTTATGTCTCAACTACAATCTTTACATAGTAATCTTTGA 1680 0.431 MANYSHPHICQCLSRLLAFRGHFPVTIAGNRRKTGQEFVEEVLSLAQGLLHLGLTPGHVVAISAYNSDRYLEWLLAIAFVGGIAAPLNYRWSFEEARLAMAAVKPVLLVIDESSYTWYSKLQQNDVPSLKWHILLDSPSSDFTKWNVLTPEMLKRHPVKLLPFDYSWAPEGAVIICFTSGTTGKPKGVTLSHGALIIQSLAKIAIVGYNEDDVYLHTAPLCHIGGLSSALTMLMAGGCHVLMPKFDAESAVDAIQQHAVTSFITVPAIMSSLISIIRHKETWKGGETVKKILNGGGSLSLELIKDTSIFFHKAKLISAYGMTETCSSLTFLTLYDPMHETTNQSLQAFGVAGSKFIHQPQGVCVGKAAPHIEMKISADASGHIGRILTRGPHIMLRYWDQTHTNPLNPNNEAWLDTGDIGSIDHYGNLWLLGRTNGRIKSGGENIYPEEVEAILLQHPGIASVVVVGIPDAHLTEMVAACIHLKENWQWSEQSASNEEFHLSRKNLQQYCIENHLSRFKIPKMFIVWRKPFPLTTTGKIKRDQVRKEVMSQLQSLHSNL 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00138 559 CDD AFD_class_I 175 540 - -
Pumo2g00138 559 Gene3D - 436 552 IPR045851 -
Pumo2g00138 559 PANTHER ACYL-COA SYNTHETASE 29 551 - -
Pumo2g00138 559 Gene3D - 10 434 IPR042099 -
Pumo2g00138 559 Pfam AMP-binding enzyme 26 440 IPR000873 -
Pumo2g00138 559 Pfam AMP-binding enzyme C-terminal domain 449 538 IPR025110 -
Pumo2g00138 559 ProSitePatterns Putative AMP-binding domain signature. 175 186 IPR020845 -
Pumo2g00138 559 SUPERFAMILY Acetyl-CoA synthetase-like 7 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00138 Pumo-Chr2 3038012 3044700 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00138 45 467 Monolignol Biosynthesis Gene Families AT3G21240 30.505 2.22e-39 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00138 K14760 - gmx:100809925 1063.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00138 2 3038012 3044700 Pumo2g00138 2 3038012 3044700 ECH