Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00130 ATGAATGCACGTGTCGCCGATTACTGCCTTCACCGACTTATGACTCAAGCTGGTACTATTGAACAGATTCTGGATGCTGGAGTCTTGGGTTATCGTGCACCAGAGTTAGCTGCTTCCAAGAAGCCAATGCCCTCCTTCAAGTCAGATGTTTATGCTTTTGGAGTGATACTTTTGGAACTTCTAACTGGAAGGTGTGCTGGTGATGTGATATCTAGTGAGGAGGGAGGTGTTGATCTGACAGATTGGGTAAGGTTGCGCGTAGCAGAAGGCCGAGGCTCAGAATGTTTTGATGCTACCTTGATGCCGGAAATGAGCAATCCAATCGCAGAAAAGGGAATGAAGGAGGTCCTGGGAATGGCAATGCGGTGCATTCGATCTGTGTCAGAAAGGCCTGGTATCAAGACTATATATGAAGATCTCTCTTCTATATAG 432 0.4653 MNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPMPSFKSDVYAFGVILLELLTGRCAGDVISSEEGGVDLTDWVRLRVAEGRGSECFDATLMPEMSNPIAEKGMKEVLGMAMRCIRSVSERPGIKTIYEDLSSI 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00130 143 SUPERFAMILY Protein kinase-like (PK-like) 2 140 IPR011009 -
Pumo2g00130 143 ProSiteProfiles Protein kinase domain profile. 1 143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g00130 143 Pfam Protein tyrosine and serine/threonine kinase 3 64 IPR001245 GO:0004672|GO:0006468
Pumo2g00130 143 Gene3D Transferase(Phosphotransferase) domain 1 1 143 - -
Pumo2g00130 143 PANTHER OS07G0626500 PROTEIN 1 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00130 Pumo-Chr2 2976870 2977301 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00130 2 143 Receptor kinase-like Gene Family AT3G51740 41.958 2.61e-23 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo2g00130 PK_Tyr_Ser-Thr 6.6e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00130 - - gmx:100793639 278.87