Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00090 ATGCTCCATGCATTGATGAGCCTTATCGCGCGCTGTTGGAAGCCGTTCGGGCCCGGTGCTGACGACGCCAATGCCGGCAAAGACGGCCTCCTCTGGTTCCGCGACATCGGAAGGTTCGCCGCCGGCGATTTCTCCATGGCCGTCGTCCAGGCCAACCAGGTCCTCGAGGACCAGAGCCAGATCGAGTCCGGCCCCTTCGGCACCTTCGTCGGCGTCTACGACGGCCACGGCGGCCCCGATTGCTCCCGCTACGTCTGCGATAACTTGTTCCGCAATCTCCAAGCGATATTGGCTGAGTCACAGAGTGTTGTGACATCTGAGGCCATTCAGCAGGCGTTCCGGCGGACTGAGGAGGGGTTCACGGCGCTTGTTTCAGAGTTGTGGAGCTCCCGGCCGCAGATTGCGACTACTGGGACGTGTTGTTTGGTTGGGGTTATTTGCCAGCAGACGCTGTTTGTGGCGAGTCTTGGAGATTCCCGTGCTGTGTTGGGTAGGAGAGTTGGCAACACCGGTGGGATGGCTGCGATTCAGTTGTCTACGGAGCACAATGCGAATGTCGAGGCTATCAGGCAGGAGCTTAAGGAATTGCACCCCGATGACCCCCAGATTGTTGTACTCAAACATGGAGTGTGGAGAGTAAAGGGCATTATTCAGGTTTCTAGATCTATAGGTGACGTATATATGAAACATGCGCAGTTTAACCGCGAACCCATTAATGCAAAATTCAGACTCCCCGAACCATTGAACATGCCTTTCTTGTCTGCTAATCCAACTATTCTTTCTCAACCTCTCCAACCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACCTGAGTAATGATCAAGCAGTGGAAATTGTTCACAGCAGTCCACGCGCGGGTAGTGCGAAGAGACTTGTGAAGGCTGCCCTACACGAAGCAGCAAGAAAACGTGAAATGCGATATTCAGACCTTTACAAGATTGACAAGAAGGTTCGTCGCCATTTTCACGACGATATAACTGTTATTGTTTTATTCTTAAACCACGACCTTATATCCAGAGGCGCAGTTCTAAATACGCCACTCACAATTCGAAGTGCTCTCGATCACTGA 1104 0.5199 MLHALMSLIARCWKPFGPGADDANAGKDGLLWFRDIGRFAAGDFSMAVVQANQVLEDQSQIESGPFGTFVGVYDGHGGPDCSRYVCDNLFRNLQAILAESQSVVTSEAIQQAFRRTEEGFTALVSELWSSRPQIATTGTCCLVGVICQQTLFVASLGDSRAVLGRRVGNTGGMAAIQLSTEHNANVEAIRQELKELHPDDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKHAQFNREPINAKFRLPEPLNMPFLSANPTILSQPLQPNDSFLIFASDGLWEHLSNDQAVEIVHSSPRAGSAKRLVKAALHEAARKREMRYSDLYKIDKKVRRHFHDDITVIVLFLNHDLISRGAVLNTPLTIRSALDH 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00090 367 SMART PP2C_4 37 342 IPR001932 -
Pumo2g00090 367 ProSitePatterns PPM-type phosphatase domain signature. 69 77 IPR000222 GO:0043169
Pumo2g00090 367 Gene3D - 37 352 IPR036457 -
Pumo2g00090 367 Pfam Protein phosphatase 2C 68 314 IPR001932 -
Pumo2g00090 367 SUPERFAMILY PP2C-like 52 345 IPR036457 -
Pumo2g00090 367 FunFam Probable protein phosphatase 2C 42 34 352 - -
Pumo2g00090 367 PANTHER PROTEIN PHOSPHATASE 41 342 IPR015655 GO:0004722|GO:0006470
Pumo2g00090 367 ProSiteProfiles PPM-type phosphatase domain profile. 43 344 IPR001932 -
Pumo2g00090 367 CDD PP2Cc 44 344 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00090 Pumo-Chr2 1864968 1870580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00090 1 364 PP2C-type Phosphatase Gene Family AT4G38520 59.151 3.99e-159 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00090 K01102 - gmx:100814799 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00090 2 1864968 1870580 Pumo2g00090 2 1864968 1870580 ECH
Pumo4g00466 4 6107681 6112161 Pumo2g00090 2 1864968 1870580 PCT