Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00086 ATGTCGTCATCTCTGATCGCCAATCCAACCACGGATCGGTCACGTGACTCGCACAGGGCAAAGAAGAAGAAGAAATCTCTCGCCAAGCAGCAACAACAACACCAGCAGGAGCAGCAGAGCCATGCGAAATGGAAAACCCACGCGCAGCAGCAGCTATACTCCTCCAAGCTCCACCAGGCGCTGGCGCGTGTCAACATCTCCGGCGACGCGCCGCGCAGCGGCAGGGCGGTGCGCGAGGCCGCCGACAGGGTCCTCGCCGTCGCCGCCAAGGGGAGGACGCGGTGGAGCCGCGCCATCCTCACGAACCGGCTCAAGCTGAAATTCAGGAAGCCGGCATACAAGAGGCAAAAGTGGTTGTTGTTGGGCCGGGCCGGCCCAAGAAGCCCCGCTTCAGCGTTCTCCGGCTCAAGGGGAAAACCTTACCCACGGTACAGCGGAAAGTTAGGGTTCTGGGCCGGTTGGTTCCCGGTTGCAGAAAAGAACCGCTTCCGGTGA 495 0.6162 MSSSLIANPTTDRSRDSHRAKKKKKSLAKQQQQHQQEQQSHAKWKTHAQQQLYSSKLHQALARVNISGDAPRSGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPAYKRQKWLLLGRAGPRSPASAFSGSRGKPYPRYSGKLGFWAGWFPVAEKNRFR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00086 164 MobiDBLite consensus disorder prediction 31 49 - -
Pumo2g00086 164 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 46 116 IPR044660 GO:0006355
Pumo2g00086 164 Coils Coil 17 40 - -
Pumo2g00086 164 MobiDBLite consensus disorder prediction 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00086 Pumo-Chr2 1827689 1828183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00086 39 110 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 55.000 1.23e-20 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00086 - - gmx:100792237 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00086 2 1827689 1828183 Pumo2g00086 2 1827689 1828183 ECH
Pumo4g00473 4 6258087 6259543 Pumo2g00086 2 1827689 1828183 PCT