Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00084 ATGGCGGAGGAGAAAAGAGAAGAGGAAGCGCACCCCACCAACTCATCATCCACCACCATGGCATTTTCCGATGAGATTCCGAACAACTTGATCAGTTTCCCTTTCCAACCACCCACCATCTTCGACATGATGCCCTCATCTTCTTCCTCGTGCGACCAAAAAGCCTCATCGTATGGTTTCATGGACCTGCTCGGTGTCAATGATTACAACGCGCCGTCGTTCGACTGGCTCCCCGCCGCCACCGCCGCCGTGCACCACCCTGCGCCGTCGCCGGCGAGCTCCAACGTCCCGGACTCCTCCGAGGTGCTGAACACTCCCGCGTCGCCTAATTTGTCGTCGAATTCGTCGTCGTCGAATGAGGCTACGGCCAACAACAACAACACCGAACGACAGAGTGGTAAACATGGGAGTGAACAAGAAGAAGCAGAAGCAGAGGAAGAGGGTGGTAATGGAGGCAGAGGAGATGACCAGGATCAAGACAAGACTAAGAAACAGCTGAAACCGAAGAAGAAGAACCAAAAGAAGCAAAGAGAACCGAGATTTGCGTTCATGACAAAGAGCGAGGTGGATCACCTAGACGATGGTTATAAGTGGCGCAAGTACGGCCAAAAAGCTGTGAAAAACAGCCCTTATCCCAGGAGCTACTACCGTTGCACTAGCGCTGGTTGCGGCGTTAAGAAGCGCGTGGAGCGTTCCTCCGAAGACCCTTCCATCGTGGTTACCACCTACGAGGGGCAGCACACGCACCCGTGCCCTGCTTCGGCACGAGCTAGCTTCGGGTTCGTTCACGAGCCTGGTGGGTTCGGACACTCAGGTTTGGGTGGTGCCGCTTCTTTCGGTTCCACACACTTCATGCTGCCACATCAGCACCAGCTGCCACAAGCTTTGATATATAACTCCACCCCTCCTTTGAGCGTTGTTAGCAACAATAATAACTACATGAACACGACGTCGTTTGGAGGCTTTGTTCAGGATCACGCGAACCGTCGTGGTTTTGGACATGAGGCGTTGTTGAGGGACAATGGGCTGCTTCAGGACATTGTGCCAACTCAGGTGAGGAAGGAGGAGAAGGATTGA 1077 0.5385 MAEEKREEEAHPTNSSSTTMAFSDEIPNNLISFPFQPPTIFDMMPSSSSSCDQKASSYGFMDLLGVNDYNAPSFDWLPAATAAVHHPAPSPASSNVPDSSEVLNTPASPNLSSNSSSSNEATANNNNTERQSGKHGSEQEEAEAEEEGGNGGRGDDQDQDKTKKQLKPKKKNQKKQREPRFAFMTKSEVDHLDDGYKWRKYGQKAVKNSPYPRSYYRCTSAGCGVKKRVERSSEDPSIVVTTYEGQHTHPCPASARASFGFVHEPGGFGHSGLGGAASFGSTHFMLPHQHQLPQALIYNSTPPLSVVSNNNNYMNTTSFGGFVQDHANRRGFGHEALLRDNGLLQDIVPTQVRKEEKD 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00084 358 MobiDBLite consensus disorder prediction 92 132 - -
Pumo2g00084 358 ProSiteProfiles WRKY domain profile. 187 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo2g00084 358 Pfam WRKY DNA -binding domain 193 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo2g00084 358 SMART WRKY_cls 192 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo2g00084 358 SUPERFAMILY WRKY DNA-binding domain 184 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo2g00084 358 MobiDBLite consensus disorder prediction 1 23 - -
Pumo2g00084 358 MobiDBLite consensus disorder prediction 85 183 - -
Pumo2g00084 358 FunFam WRKY transcription factor 57 178 252 - -
Pumo2g00084 358 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 86 289 IPR044810 GO:0003700
Pumo2g00084 358 Gene3D WRKY domain 176 253 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo2g00084 358 MobiDBLite consensus disorder prediction 133 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00084 Pumo-Chr2 1767045 1769568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00084 162 356 WRKY Transcription Factor Family AT2G47260 52.709 7.97e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo2g00084 WRKY 3.6e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00084 - - gmx:100812252 418.313