Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00058 ATGATCGTGAGCCAGAACATGGTGACGGAAGCGGAAATTATCTGCAAGCAGAGCATTCCGATGTTGGACGTGAAGTACCACCTTCGCGTGGCGCAAGAACACGGCGTTAAGGTCGAGGTTTCGCCCACCTCTAACGCTGTTCCAATCTTCGGCCACGTGCGGGTTCCCGCTGATTCGGTTTCCACCGAAACGACTCGTTTTGAATCGGTTGTGAGTTGCTCTGAGATGATTGAAGAATCCATTTTAGAGACTCCTGCTACCAAATTTACACCGAATGTTCGATCTGGTTGCTGTGCTGAAATTGGACCCAGGGGATCTATGGATGATGAGCACATTCAGATAGATGATCTAGCAGCCCACCTTGGATTTGTGTTCGAGCAGCCTACACCAAGTGCGTTTTATGCAGTTTTTGATGGCCATGGAGGGCCTGATGCAGCTGCCTTTGTTAAGAACAATGCTATGAGATTATTTTTTGAGGATGCTGATATGCTGCAATCATATGATGCTGATGCACTTTTTCTGAAGAAGTTGGAAGATTCTCATCGGAGAGCTTTCTTAGGTGCAGACCTTGCCTTAGCTGATGAGCAAAGTGTTAGTAGTTCCTGTGGAACAACAGCGTTGACTGCCCTTGTACTTGGAAGGCATTTGATGGTTGCTAATGCTGGTGACTGTCGAGCTGTTCTTTGTAGGCGAGGAGTAGCTGTTGATATGTCCCAAGATCACAGGCCAAGTTATTTACCAGAACGCAGGAGAGTGGAGGAGCTAGGTGGTTTCATTAATGATGGGTATCTCAACAGTTATCTTTCTGTTACTCGTGCCCTTGGAGATTGGGACTTGAAATTTCCACTTGGATCTGCATCGCCTCTTATTGCTGAGCCAGAGGTTCAGGTGGTCACATTGACAGAGGATGATGAGTTCTTGATCATTGGTTGTGATGGAATTTGGGATGTAATGTCAAGCCAGGATGCAGTTAGTCTTGTGCGACGTGGATTAAGAAGGCATGATGACCCACAACAATGTGCCAGAGAGTTAGTTAAGGAAGCATTGCGCCTGCACACATCAGATAATCTTACTGTGATTGTTATCTGCTTGTCCCCTGTCCAAATTGTCGAATCATGTCCACCCCAAAGGCGAAGATTCAGAGCTTGCTCTCTGTCTGAAGAGGCCCGGAACAGATTGAGGAGCTTGCTAGAGGGAAACTGA 1203 0.4697 MIVSQNMVTEAEIICKQSIPMLDVKYHLRVAQEHGVKVEVSPTSNAVPIFGHVRVPADSVSTETTRFESVVSCSEMIEESILETPATKFTPNVRSGCCAEIGPRGSMDDEHIQIDDLAAHLGFVFEQPTPSAFYAVFDGHGGPDAAAFVKNNAMRLFFEDADMLQSYDADALFLKKLEDSHRRAFLGADLALADEQSVSSSCGTTALTALVLGRHLMVANAGDCRAVLCRRGVAVDMSQDHRPSYLPERRRVEELGGFINDGYLNSYLSVTRALGDWDLKFPLGSASPLIAEPEVQVVTLTEDDEFLIIGCDGIWDVMSSQDAVSLVRRGLRRHDDPQQCARELVKEALRLHTSDNLTVIVICLSPVQIVESCPPQRRRFRACSLSEEARNRLRSLLEGN 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00058 400 ProSiteProfiles PPM-type phosphatase domain profile. 94 364 IPR001932 -
Pumo2g00058 400 Gene3D - 79 368 IPR036457 -
Pumo2g00058 400 SUPERFAMILY PP2C-like 88 366 IPR036457 -
Pumo2g00058 400 PANTHER PROTEIN PHOSPHATASE 2C 79 362 IPR015655 GO:0004722|GO:0006470
Pumo2g00058 400 SMART PP2C_4 84 362 IPR001932 -
Pumo2g00058 400 FunFam Probable protein phosphatase 2C 22 78 367 - -
Pumo2g00058 400 ProSitePatterns PPM-type phosphatase domain signature. 133 141 IPR000222 GO:0043169
Pumo2g00058 400 CDD PP2Cc 93 364 IPR001932 -
Pumo2g00058 400 SMART PP2C_SIG_2 109 364 IPR001932 -
Pumo2g00058 400 Pfam Protein phosphatase 2C 102 356 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00058 Pumo-Chr2 1268781 1271318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00058 1 399 PP2C-type Phosphatase Gene Family AT1G48040 58.313 1.01e-148 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00058 K14803 - gmx:100798957 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00058 2 1268781 1271318 Pumo2g00058 2 1268781 1271318 ECH
Pumo4g00509 4 6782095 6784543 Pumo2g00058 2 1268781 1271318 PCT