Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00050 ATGGAAGCAGCTGAGCCCGCCACCGCTCCACAGTTGGCTCTTGCCGACACAGACATCAACTGGGACAGGTTGGATAAAACTAAGTTCCACGTGATTGGCGCCATTCTCTTCACGGCTCAATCAGCCCTGCTTCATCCAACGGCAGTGGTGAAGACACGCATGCAAGTGGCGGGGTCGGGGCTCTCCCACGCTCGAGGAATGTCGGTGTTCACTCACATTCTCCGGAGCGATGGCATTCCGGGAATCTTCAGAGGCTTCGGCACTTCCGCCATTGGTTCAATGCCCGGAAGGGTCCTCGCTCTCACCTCTCTCGAGGTCTCAAAGGACATTATCTTAAAACACACGCAAGGCACTCGCATTCCAGAAGCTTCGCGCGTTGGCCTCGCTAACGGACTCGCTGGCATGCTCTCCAACTTGGTTTCTTGTGTCTACTTCGTGCCCTTGGATGTGATTTGTCAGAGGTTGATGGTACAGGGTCTTCCTGGGACAACGTGTTGTAGAGGGCCCTTTGATGTTGTTCGTAAGGTTGTGGAGGCTGAGGGGTTTCGTGGCTTGTATAGGGGTTTTGGATTAACGGCTCTAACCCAGTCCCCTGCATCTGCACTCTGGTGGGGTTCATATGCTGCTGCACAACACCTCATTTGGAGGAGTTTGGGCTACAAGGATGATATGGGGAACAAACCTTCACATGTGGAAATGGTGACAGTTCAGGCTACTGCTGGGATGGTGGCTGGTGCTTGTTCCTCTGTAATCACTACTCCCATAGATACTGTAAAAACACGTCTTCAGGTTATGGACAACTATGGTTCTGGAAGACCGTCAGTACTGAAGACAGCAAAGACTCTCCTTAATGAAGATGGATGGTGGGGATTTTACAGGGGGTTTGGACCAAGATTTTTAAACATGTCACTTTATGGAACAACCATGATTGTTACTTATGAACTGATAAGTATGTCACTTCTTGCTTATTTATTTTGGCACCAATACTTTTTTGAGAATGGTTAG 1005 0.4975 MEAAEPATAPQLALADTDINWDRLDKTKFHVIGAILFTAQSALLHPTAVVKTRMQVAGSGLSHARGMSVFTHILRSDGIPGIFRGFGTSAIGSMPGRVLALTSLEVSKDIILKHTQGTRIPEASRVGLANGLAGMLSNLVSCVYFVPLDVICQRLMVQGLPGTTCCRGPFDVVRKVVEAEGFRGLYRGFGLTALTQSPASALWWGSYAAAQHLIWRSLGYKDDMGNKPSHVEMVTVQATAGMVAGACSSVITTPIDTVKTRLQVMDNYGSGRPSVLKTAKTLLNEDGWWGFYRGFGPRFLNMSLYGTTMIVTYELISMSLLAYLFWHQYFFENG 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00050 334 Pfam Mitochondrial carrier protein 236 318 IPR018108 -
Pumo2g00050 334 Pfam Mitochondrial carrier protein 129 215 IPR018108 -
Pumo2g00050 334 Pfam Mitochondrial carrier protein 32 114 IPR018108 -
Pumo2g00050 334 Gene3D Mitochondrial carrier domain 122 323 IPR023395 -
Pumo2g00050 334 ProSiteProfiles Solute carrier (Solcar) repeat profile. 232 319 IPR018108 -
Pumo2g00050 334 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 213 IPR018108 -
Pumo2g00050 334 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 10 317 - -
Pumo2g00050 334 ProSiteProfiles Solute carrier (Solcar) repeat profile. 25 110 IPR018108 -
Pumo2g00050 334 SUPERFAMILY Mitochondrial carrier 22 315 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00050 Pumo-Chr2 1194168 1196546 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00050 16 316 Chloroplast and Mitochondria Gene Families AT5G15640 49.175 6.63e-102 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00050 K15121 - gmx:112997745 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00050 2 1194168 1196546 Pumo2g00050 2 1194168 1196546 ECH