Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00039 ATGATGGTGATGGAGATGTGTTTCATGCGTATGTGGGTGGTCCTTGTGGCCATTGCTGGTGCTCTTTTAGTCCTAAGATCTATCCTCAAGAATGTAAATTGGTGGCTCTATGAATCCAAATTGGGTGTGAAGCAGTACTCTTTGCCCCCAGGTGACATGGGTTGGCCCTTCATTGGCAACATGTGGTCCTTCCTCAAAGCTTTCAAGTCCAAGGACCCTGATTCCTTCATCTCCTCCTTTGTCTCCAGATATGGAAGAACTGGAATGTACAAGACCTTGATGTTTGGAAACCCAAGTGTAATTATGACAACACCTGAAACATGCAAAAGGGTGCTGACAGACGATGATAAATTCACAACTGGTTGGCCTCGTTCTACTATAGAGCTCATTGGAAAGAGGTCATTTATTTCAATGTCTTATGAAGAACACAAGCGCCTTAGGCGTTTGACATCCTCTTCAATCAATGGCATGGAAGCACTGTCCCTCTACTTGACATACATTGAAAAAAATGTTAAAAGTTCTTTGGAGAAATGGGCCAACTTGGGACAGATTGAGTTTTTAACTGAGATCAGGAAGCTTACCTTCAAAATCATTATGCATATTTTCCTTAGCTCAGAAAGTGAACCTGTTATGGAGGCTTTGGAGAGGGAATACACAGCACTTAATCATGGAGTTAGAGCCATGAGAATTAATATTCCAGGATTTGCATACCACAAAGCATTCAAGGCAAGGAAAAATCTAGTGGCCATATTTCAATCCATTGTGGACGAGAGAAGAAACATAAGGAAGGGATATGTTCCTGGAAAAGCCAAAGATATGATGGATGCTCTGATAGATGTTGAAGATGATGATGGAAGAAAGTTGAGTGATGAGGACATCATTGATATCATGTTGATGTACTTGAATGCAGGCCACGAGTCTTCAGGACATATTACCATGTGGGCAACCTTCTTCCTGCAAAAGCACCCAGAATATCTCCAAAAGGCTAAGGCAGAACAAGAAGAAATAGTAAGGAGAAGACCTCCAACACAGAAAGGGTTAACACTTAAGGAAGTTCGGGAAATGGATTTTCTTTACAAGGTGATTGATGAAACAATGCGTGTGATTACATTCTCACTAGTGGTCTTTCGGGAGGCAAAATCTGATGTCAATATCAATGGATACACAATTCCAAAAGGTTGGAAAGCGCTTGTGTGGTTCAGATCAGTTCACCTTGATCCTGAAATATATCCTAATCCAAAGGAATTTAACCCCTATAGATGGAATAAAGAACACAAGGCCGGAGAATTCCTTCCCTTTGGAGCAGGAAGTAGATTGTGTCCTGGGAACGATCTTGCCAAGATGGAAATAGCAGTTTTTCTTCACCATTTCCTTCTGAATTACCGGTTTGAACAGCATAATCCTAATTGCCCTGTGAGATACTTGCCACATACAAGGCCAATGGACAATTGCTTGGGAAGGGTCAGGAAATGTTCATCTACAACAACCTAA 1491 0.4152 MMVMEMCFMRMWVVLVAIAGALLVLRSILKNVNWWLYESKLGVKQYSLPPGDMGWPFIGNMWSFLKAFKSKDPDSFISSFVSRYGRTGMYKTLMFGNPSVIMTTPETCKRVLTDDDKFTTGWPRSTIELIGKRSFISMSYEEHKRLRRLTSSSINGMEALSLYLTYIEKNVKSSLEKWANLGQIEFLTEIRKLTFKIIMHIFLSSESEPVMEALEREYTALNHGVRAMRINIPGFAYHKAFKARKNLVAIFQSIVDERRNIRKGYVPGKAKDMMDALIDVEDDDGRKLSDEDIIDIMLMYLNAGHESSGHITMWATFFLQKHPEYLQKAKAEQEEIVRRRPPTQKGLTLKEVREMDFLYKVIDETMRVITFSLVVFREAKSDVNINGYTIPKGWKALVWFRSVHLDPEIYPNPKEFNPYRWNKEHKAGEFLPFGAGSRLCPGNDLAKMEIAVFLHHFLLNYRFEQHNPNCPVRYLPHTRPMDNCLGRVRKCSSTTT 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00039 496 CDD CYP90-like 81 488 - -
Pumo2g00039 496 Gene3D Cytochrome P450 38 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g00039 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Pumo2g00039 496 PANTHER CYTOCHROME P450 26 45 477 - -
Pumo2g00039 496 Pfam Cytochrome P450 49 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g00039 496 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g00039 496 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g00039 496 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g00039 496 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g00039 496 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g00039 496 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g00039 496 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g00039 496 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo2g00039 496 FunFam Ent-kaurenoic acid oxidase 39 491 - -
Pumo2g00039 496 SUPERFAMILY Cytochrome P450 44 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00039 Pumo-Chr2 1036278 1043631 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00039 5 490 Cytochrome P450 AT2G32440 66.119 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00039 K04123 - gmx:100781238 978.778