Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo292g00001 ATGACTCCGAAGATTTTGCAGAGAAAAAAAAATAATGAACCTTCACAGAGTAGCATGACAATGCCAATGCTAAACCTCCAGAAATTCTTTCACTTGTTTCCCTCGCTCCCCTTCTACCTCCTCATACTGCGTCTCTGGCCATCATACGTGATGGCCAGAGAGGTTATGATACCAATAGAGGTAGTTCTTGATTTGAACTCCCCAATTGGAAGCATGGCTAACGGCTGCATATGGATGGCATATCATGATTTCTATAAACAACATCCTCATTTTCAAACCAGACTTGATCTTAGAACAAGAAATTCTGACCGTGATATAGTCAACGCAGCATATGCAGCCTCTGGTTTAATGAAGAAAGAAAAGGTGAAGGCAATTATCGGACCTCAAACATCAGAACAAGCAAGGTATGTAATAAACCTTGGGAGCGAACATGGCGTCCCCGTTGTCTCCTTCTCCGCCATGAGTCCATCTCTTTCCCCAATCCGTACTCCCACTTTCATACGAATGGCGCAAAACGATTCCTCTCAGGTGAAAGCCATAGCAGCCATTGCGGCCATTGCGGAAGCATATGGATGGCAAGAAGTGATCCTTGTATACGAAAACATTGAGTACGACAACGGTCTCGTCCCACATCTCATAGATGCCTTGGACGCAGTTGACACAAAAGTACCTTACAGAAGCGTTATTGATCCCAGTTCTGAAGAACACCACGTTTTGGAAGAGCTCAAAAACCTAAAGCAAAATTCAACAAGAATATTCCTTTTTCACATGATGGGTGAAAGAGGAGCGAAATTCTTTTCCACGGTAGAGAAAGCTGGAATGATGAGCGAAGGGTACAGATGGGTAGTCACCGAAGGGCTATCGGTTGAGTTAAACCCTTCAGCTTCAGAAAGAATGGACAGCATGCAAGGTGTCTTGGGAGTGAGGTCAAAAGTGAAAAACCACAAAAAGCTTGACGACTTTAAGAAAAGATGGAAAGCCTTGTCCGTTATGGAAAAGAACAAAAAGTATCACACTCATACTCGTACTCATACTCATGCCATGACATTGTTCGGGTTGTGGGCTTACGACACAGTGTGGGCATTGGCCATGGCCGTAGAAAATGCAACCAACGGGAAACAGAGTGGTTCCCTTGTAAATGCAATCCTGGCTATGAAATTCCAAGGCCTATCTGGGTATTTTGATTTGAAAGAAGGACAATTGGAGCCGTTAGTGTTTGAAGTGTTCAATGTGGTGGGACATAAAGAGAGAATTATTGGATATTGGAGCCTTGAAAGAGGGCTATTCCAAGATGACCAATCAAATGTTTTCCAAGAAAAGCAGAGACTGAGGCAACCAGTTTGGCTAGGTTACACGATGGATCAGCCACCCAAGTTGAGATTTGGGGTCCCATTGAGAAAGGGTTTCACTGAGTTTGTAAAAGTGGAAACCGTACTTAATGCCACAAAATTTTTCGGGTTCATTGTTGATGTGCTTTTAGAGGTGTTGAAGGAATTGCCTTTCTCGGTATAG 1512 0.4345 MTPKILQRKKNNEPSQSSMTMPMLNLQKFFHLFPSLPFYLLILRLWPSYVMAREVMIPIEVVLDLNSPIGSMANGCIWMAYHDFYKQHPHFQTRLDLRTRNSDRDIVNAAYAASGLMKKEKVKAIIGPQTSEQARYVINLGSEHGVPVVSFSAMSPSLSPIRTPTFIRMAQNDSSQVKAIAAIAAIAEAYGWQEVILVYENIEYDNGLVPHLIDALDAVDTKVPYRSVIDPSSEEHHVLEELKNLKQNSTRIFLFHMMGERGAKFFSTVEKAGMMSEGYRWVVTEGLSVELNPSASERMDSMQGVLGVRSKVKNHKKLDDFKKRWKALSVMEKNKKYHTHTRTHTHAMTLFGLWAYDTVWALAMAVENATNGKQSGSLVNAILAMKFQGLSGYFDLKEGQLEPLVFEVFNVVGHKERIIGYWSLERGLFQDDQSNVFQEKQRLRQPVWLGYTMDQPPKLRFGVPLRKGFTEFVKVETVLNATKFFGFIVDVLLEVLKELPFSV 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo292g00001 503 Gene3D - 78 178 - -
Pumo292g00001 503 FunFam Glutamate receptor 172 336 - -
Pumo292g00001 503 Pfam Receptor family ligand binding region 79 412 IPR001828 -
Pumo292g00001 503 CDD PBP1_GABAb_receptor_plant 59 430 IPR044440 -
Pumo292g00001 503 Gene3D - 179 347 - -
Pumo292g00001 503 PANTHER OS06G0188250 PROTEIN 34 413 - -
Pumo292g00001 503 SUPERFAMILY Periplasmic binding protein-like I 61 423 IPR028082 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo292g00001 57 503 Ion Channels AT2G29120 37.938 5.15e-95 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo292g00001 K05387 - gmx:100799966 727.628