Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo28g00007 ATGGAGAGAAGTCTCCTCAAGGATTTTGAGCTCGAGCACAAAAATCCCTCCGTCGAAGCCCTCCGCCGATGGAGATCCGCCGTCTCTCTCGTCAAAAACCACCGCCGCCGCTTCCGCATGGTCGCCGATCTCGATAAGCGCGTCGAAGCCGAACAGATTAAGCAGGGAATCAAGGAAAAAATTCGAATTGCTCTCTATGTTCAAAAGGCAGCATTACAATTTATTGATGCTGGTAATCGAGTTGAATACAAGCTATCAAGTGAGGCAAGAGATGCTGGTTTTGGTATTCATCCAGACGAGATTGCTGCTATTGTTCGTGGCCATGATAACAAGACCTTAAATGATATTGGTGGAGTTGAATCCATTGCAAGGAAATTGTCAGTTTCTGTGGATAGAGGTGTCAACGAAGAGAGTATAAATAGCAGACAACAGATTTATGGATTCAATCGTTATACCGAAAAACCTTCTAGATCGTTCCTGATGTTTGTGTGGGATGCATTGCAGGACTTAACTCTAATCATTCTCATGGTTTGTGCTGTAGTTTCTATAGGTATAGGGATTGCCACTGAAGGGTGGCCAAAGGGAACGTATGATGGTGTGGGAATCATACTCAGTATATTCTTGGTAGTCATTGTTACAGCTGTCAGTGATTACAAGCAGTCCCTGCAGTTCAGGGATTTGGACAAGGAGAAGAAAAAGATATTTGTTCAGGTCACTAGAGATGGGAAAAGACAGAAGATCTCAATTTATGATATAGTAGTTGGTGATGTTGTTCATTTGTCAACTGGGGATCAAGTTCCAGCTGATGGGATTTTTATATCAGGATACTTTTTGCTTATTGATGAATCGAGTTTGTCAGGTGAGAGCGAACCTGTAAATATAAATGAAGAAAAACCTTTTCTTCTTTCAGGAACCAAAGTGCAGGATGGTCAGGGGAAGATGTTAGTTACAACTGTTGGCATGAGGACTGAATGGGGAAAATTGATGGAGACTCTAAACGAGGGAGGAGAGGATGAAACCCCATTGCAGGTTAAATTAAATGGAGTTGCTACTATTATTGGTAAAATTGGTTTGACATTTGCCATTTTGACATTTGTGGTGTTGACAGTTAGGTATGTGGTCGAAAAAGCGCTTCATGGTGAGTTTGCCAGTTGGTCTTCAGATGATGCAATGAAGTTACTGGACTTCTTTGCTATTGCTGTAACCATAATAGTTGTTGCAGTTCCGGAAGGATTACCACTGGCTGTGACACTCAGTCTTGCTTTTGCAATGAAAAAATTAATGAATGACAAGGCACTTGTAAGGCACCTTTCTGCTTGTGAGACTATGGGTTCAGCTAGTTGCATTTGCACAGATAAGACAGGGACATTGACCACTAACAAAATGGTAGTTACTAAAACATGGATATGCGAAAAAGCCATGCAGATAAAAGGTAATGAGAGTGCAGACGAACTGAAAACATGTACACCTGAAGGAGTTCTAAACATCCTTTTGCAGGCTATATATCAAAATACTTCTGCTGAAGTAGTTACGGATAAAGATGGAAAGGGCACAATATTGGGAACCCCAACAGAATCAGCATTATTGGAATTTGGCTGCCTTTTGGGTGCTGATTTTGATGCGTATGCACAGCATAGAGAGTATAAGATACTCAAAGTTGAGCCATTCAATTCAGTCCGAAAGAAAATGTCTGTGCTTGTGGGTCTTCCTGATGGAGGTGTCCGAGCTTTCTGCAAAGGTGGATCAGAAATAATATTAAAAATGTGTGACAAAATTATTGATTGCAATGGGGAAGTTGTTGATCTTCCTGAAGACCGTGCAAATAACGTCTCTGATGTTATAAATGGATTTGCCTCTGAAGCTTTGAGAACTCTTTGTTTGGCCTTCAAAGAGATAAATGAAACCCATGGGGAACCCAACATTCCTGAAAGTGGCTATACTCTAATAGGCTTAGTAGGAATCAAGGATCCTGTACGCCCTGGGGTTAAGGAAGCTGTTCAAACTTGTATAGCTGCTGGAATAACTGTCCGCATGGTTACTGGTGATAACATAAATACAGCTAAAGCTATAGCTAAAGAATGCGGTTTACTTACCGAGCGTGGTCTAGCCATAGAAGGTCCAGATTTTTGTGACTTGTCTCCTGAGCAAATGAAGGATGTCATACCAAGAATCCAGGTGATGGCACGATCCTTACCTCTCGACAAGCATAAGTTAGTAACCAATTTGAGGAAAACGTTTGGTGAGGTTGTTGCTGTTACTGGCGATGGAACTAACGATGCTCCTGCACTGCGTGAGGCAGACATTGGACTTGCAATGGGCATAGCAGGAAGTGAGGTTGCCAAAGAAAATGCTGATGTCATTATAATGGATGATAACTTCACGACTATTGTCAATGTTGTCAAATGGGGACGTTCAGTATATATAAACATTCAAAAATTTGTGCAGTTTCAATTGACAGTTAATGTTGTTGCTCTGGTTATCAACTTCTTTTCTGCATGCATCACTGGTTTGTTGGTTAATGGAATTTGTTTTCCCTTTTATATTCTGTTGAATTTGTTTCAAGCAACATTGGTGATACTCCTCTTTCTTTCAGGATCTGCTCCACTCACAGCTGTTCAGTTGCTTTGGGTCAACTTGATCATGGACACTCTTGGTGCATTAGCCCTGGCTACTGAACCTCCTAACGATGGACTTTTGAAAAGACCCCCAGTTGCAAGGGGAGCAAACTTTATCACCAAACCTATGTGGAGGAATATCATTGGTCAAAGCATATATCAATTAATTATCCTTGGGATTCTAAATTTTGAGGGGAAGAGGCTACTCGGAATTAGTGGTTCAGATGCAACAAAAGTGCTCAACACTTTGATATTCAACTCCTTTGTATTTTGCCAGGTGTTTAATGAGATAAACAGCAGAGATATTGATAAGATAAACATATTCAGAGGCATGTTTGACAGCTGGATATTTTTGGCGATAATTTTTGCCACCGTGGCATTTCAAGTGGTGATAGTTGAATTCCTTGGAACGTTTGCCAGCACTGTGCCTCTAAACTGGCAATTCTGGTTACTGAGTGTGCTAATCGGAGCAGTTAGCATGCCTATAGCTGCTATCCTCAAGTGCATCCCAGTTGAAAGAGATCCTAGTAAGCAGCACCATGATGGTTATGAGGCACTGCCATCTGGTCCCGAGCTGGCATAA 3198 0.4149 MERSLLKDFELEHKNPSVEALRRWRSAVSLVKNHRRRFRMVADLDKRVEAEQIKQGIKEKIRIALYVQKAALQFIDAGNRVEYKLSSEARDAGFGIHPDEIAAIVRGHDNKTLNDIGGVESIARKLSVSVDRGVNEESINSRQQIYGFNRYTEKPSRSFLMFVWDALQDLTLIILMVCAVVSIGIGIATEGWPKGTYDGVGIILSIFLVVIVTAVSDYKQSLQFRDLDKEKKKIFVQVTRDGKRQKISIYDIVVGDVVHLSTGDQVPADGIFISGYFLLIDESSLSGESEPVNINEEKPFLLSGTKVQDGQGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIGLTFAILTFVVLTVRYVVEKALHGEFASWSSDDAMKLLDFFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNKMVVTKTWICEKAMQIKGNESADELKTCTPEGVLNILLQAIYQNTSAEVVTDKDGKGTILGTPTESALLEFGCLLGADFDAYAQHREYKILKVEPFNSVRKKMSVLVGLPDGGVRAFCKGGSEIILKMCDKIIDCNGEVVDLPEDRANNVSDVINGFASEALRTLCLAFKEINETHGEPNIPESGYTLIGLVGIKDPVRPGVKEAVQTCIAAGITVRMVTGDNINTAKAIAKECGLLTERGLAIEGPDFCDLSPEQMKDVIPRIQVMARSLPLDKHKLVTNLRKTFGEVVAVTGDGTNDAPALREADIGLAMGIAGSEVAKENADVIIMDDNFTTIVNVVKWGRSVYINIQKFVQFQLTVNVVALVINFFSACITGLLVNGICFPFYILLNLFQATLVILLFLSGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLLKRPPVARGANFITKPMWRNIIGQSIYQLIILGILNFEGKRLLGISGSDATKVLNTLIFNSFVFCQVFNEINSRDIDKINIFRGMFDSWIFLAIIFATVAFQVVIVEFLGTFASTVPLNWQFWLLSVLIGAVSMPIAAILKCIPVERDPSKQHHDGYEALPSGPELA 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo28g00007 1065 Gene3D - 16 77 - -
Pumo28g00007 1065 FunFam Calcium-transporting ATPase 460 657 - -
Pumo28g00007 1065 SFLD p-type atpase 432 805 IPR044492 -
Pumo28g00007 1065 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 456 662 IPR023299 GO:0000166
Pumo28g00007 1065 Gene3D - 447 798 IPR023214 -
Pumo28g00007 1065 Gene3D - 460 657 IPR023299 GO:0000166
Pumo28g00007 1065 PRINTS P-type cation-transporting ATPase superfamily signature 753 772 - -
Pumo28g00007 1065 PRINTS P-type cation-transporting ATPase superfamily signature 281 295 - -
Pumo28g00007 1065 PRINTS P-type cation-transporting ATPase superfamily signature 672 682 - -
Pumo28g00007 1065 PRINTS P-type cation-transporting ATPase superfamily signature 777 789 - -
Pumo28g00007 1065 PRINTS P-type cation-transporting ATPase superfamily signature 450 464 - -
Pumo28g00007 1065 PRINTS P-type cation-transporting ATPase superfamily signature 650 661 - -
Pumo28g00007 1065 Pfam Ca2+-ATPase N terminal autoinhibitory domain 6 49 IPR024750 GO:0005516
Pumo28g00007 1065 PANTHER CATION TRANSPORTING ATPASE 87 1043 - -
Pumo28g00007 1065 Gene3D - 133 333 - -
Pumo28g00007 1065 FunFam Calcium-transporting ATPase 651 798 - -
Pumo28g00007 1065 Pfam haloacid dehalogenase-like hydrolase 448 767 - -
Pumo28g00007 1065 SMART Cation_ATPase_N_a_2 115 187 IPR004014 -
Pumo28g00007 1065 Pfam Cation transporter/ATPase, N-terminus 117 182 IPR004014 -
Pumo28g00007 1065 FunFam Calcium-transporting ATPase 165 222 - -
Pumo28g00007 1065 FunFam Calcium-transporting ATPase 16 76 - -
Pumo28g00007 1065 NCBIfam HAD-IC family P-type ATPase 720 837 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo28g00007 1065 NCBIfam HAD-IC family P-type ATPase 202 472 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo28g00007 1065 NCBIfam HAD-IC family P-type ATPase 546 698 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo28g00007 1065 ProSitePatterns E1-E2 ATPases phosphorylation site. 452 458 IPR018303 -
Pumo28g00007 1065 Pfam Cation transporting ATPase, C-terminus 867 1040 IPR006068 -
Pumo28g00007 1065 PRINTS H+-transporting ATPase (proton pump) signature 753 769 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo28g00007 1065 PRINTS H+-transporting ATPase (proton pump) signature 785 810 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo28g00007 1065 PRINTS H+-transporting ATPase (proton pump) signature 610 628 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo28g00007 1065 Pfam E1-E2 ATPase 235 428 - -
Pumo28g00007 1065 SUPERFAMILY Calcium ATPase, transmembrane domain M 117 1043 IPR023298 -
Pumo28g00007 1065 FunFam Calcium-transporting ATPase 212 333 - -
Pumo28g00007 1065 Gene3D - 165 1041 - -
Pumo28g00007 1065 SFLD C1.7: P-type atpase like 432 805 - -
Pumo28g00007 1065 SUPERFAMILY Calcium ATPase, transduction domain A 235 331 IPR008250 -
Pumo28g00007 1065 NCBIfam calcium-translocating P-type ATPase, PMCA-type 110 836 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pumo28g00007 1065 CDD P-type_ATPase_Ca_PMCA-like 139 915 - -
Pumo28g00007 1065 SUPERFAMILY HAD-like 449 886 IPR036412 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo28g00007 57 1062 Primary Pumps ATPases AT3G57330 71.173 0.0 1462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo28g00007 K01537 - gmx:100783489 1908.26