Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo285g00002 ATGCTTACATTGGCTTTATATCACTGGCTGCAGGATGAAATTTCAAGCCCTCTTAGTGCTCGAATTTTCGAACTTTGTAACACTGATTTTTTCCCAGAGGCTTTGCCAAATTCTGAGGTTACTTCCAGCTCAAACTGTTGCTATGAGGAGAACTCCTCATATGCCACAACAAACATATCTGTAACTATAGATGCAGAAAATAAGTTGAATAGCAATAGCAACACAGTCACCACCCCAACAAGCACTACCACCACCAACAACAACACAACCAACAGTAGTAACCTGTCTATTATCTTTGACTCCCAAGAAGAAATTGACAATGACATCTCTGCCTCCATAGACTTCACACTATCTCCATCTTTCAATGTTCCCCCATTTCTCCCAGTCACATCCCAGCAAGAACAGTTTGATTTCTCTTCTGTGCAGCATCAGGTCCAACTAGCAGCATGTTCAGTTGTGGAGGGCTTCTCTCAGTATCCCACTGACTCTGTTGGACCTCCTCTTATGGGGGCTCCATTACCTTCTGTTTTTGAAGAGGACTGCATATCTTCTGTCCCTTCTTATATGCCTCTTAACCCCTCATCTCCTTGCACTTATCTCAGTCCTGGCATGCCACCATACATGCCTCCTGGCCCCCTTACTACTGCCTTGTCAACTGATAGTTCTGGAATATTTGGTGGGAACATTCTTCTTGGTTCTGAACTTCAGACACAAGAATTGGAATACCAAGGAGAAAATGGAAGAATGTATTGTACAGATTCAATTCAGCGGGTGTTTAACCCTCCAGACCTTCAGGCACTTGGTACTGAGAGTCAGCAACTAGTACCCGGGGCTGGTAGTTCTGCCACTCTAACACCAGAAATCTCAAACTTAGAGGACTCCTCCTTCAAGGTTGGAAAACTTTCTGTTGAGCAAAGGAAAGAAAAGATCAATAGATACATGAAGAAAAGAAATGAAAGAAACTTCAGCAAGAAAATTAAGTATGCCTGCCGCAAAACTCTGGCAGATAGCCGACCTCGGGTTAGAGGAAGGTTTGCAAAGAATGATGACTTCGGAGAGACCAATAGAACTACTAGTAGCAATCATGAAGAAGATGATGAAGAAGAAGTAGTTGTGAAAGATGAAGAAGATATGGTTGATTCCTCAGATATCTTTGCTCATATCAGTGGGGTGAACTCCTTCAAATGCAACTATTCCATCCAGTCCTGGATTTGA 1215 0.428 MLTLALYHWLQDEISSPLSARIFELCNTDFFPEALPNSEVTSSSNCCYEENSSYATTNISVTIDAENKLNSNSNTVTTPTSTTTTNNNTTNSSNLSIIFDSQEEIDNDISASIDFTLSPSFNVPPFLPVTSQQEQFDFSSVQHQVQLAACSVVEGFSQYPTDSVGPPLMGAPLPSVFEEDCISSVPSYMPLNPSSPCTYLSPGMPPYMPPGPLTTALSTDSSGIFGGNILLGSELQTQELEYQGENGRMYCTDSIQRVFNPPDLQALGTESQQLVPGAGSSATLTPEISNLEDSSFKVGKLSVEQRKEKINRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGETNRTTSSNHEEDDEEEVVVKDEEDMVDSSDIFAHISGVNSFKCNYSIQSWI 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo285g00002 404 MobiDBLite consensus disorder prediction 341 371 - -
Pumo285g00002 404 MobiDBLite consensus disorder prediction 341 363 - -
Pumo285g00002 404 Pfam CCT motif 306 348 IPR010402 GO:0005515
Pumo285g00002 404 MobiDBLite consensus disorder prediction 70 89 - -
Pumo285g00002 404 ProSiteProfiles CCT domain profile. 306 348 IPR010402 GO:0005515
Pumo285g00002 404 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 42 367 IPR045281 GO:0009909
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo285g00002 276 355 C2C2-CO-like Transcription Factor Family AT5G24930 37.647 1.81e-11 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pumo285g00002 CCT 3.4e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo285g00002 - - gmx:100813806 682.174