Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo281g00007 ATGGGAAGGTCACCATGCTGTGAGAAGACGGGGCTAAAGAAAGGGCCATGGACACCGGAGGAAGATCAAAAGCTCATTGCTTTCATCGAAAAGCATGGCCATGGAAGCTGGCGTGCATTGCCTGCAAAAGCTGGCCTTAGAAGATGTGGAAAGAGTTGCAGACTTAGGTGGACTAATTACCTCAGACCTGATATAAAACGAGGAAAGTTCAGCTTGCAGGAAGAGCAAACCATTATTCAACTTCATGCCCTTCTAGGAAACAGATGGTCAACCATAGCATCTCACTTGCCCAAGAGAACAGACAATGAGATCAAGAACTACTGGAATACCCACCTCAAGAAGAGGCTCGACAAAATGGGCATAGACCCCACCTACTCACAAGCCAAAAATTGA 393 0.4656 MGRSPCCEKTGLKKGPWTPEEDQKLIAFIEKHGHGSWRALPAKAGLRRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSTIASHLPKRTDNEIKNYWNTHLKKRLDKMGIDPTYSQAKN 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo281g00007 130 CDD SANT 69 112 IPR001005 -
Pumo281g00007 130 FunFam MYB transcription factor 69 116 - -
Pumo281g00007 130 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pumo281g00007 130 Gene3D - 69 116 - -
Pumo281g00007 130 SMART sant 13 63 IPR001005 -
Pumo281g00007 130 SMART sant 66 114 IPR001005 -
Pumo281g00007 130 CDD SANT 16 61 IPR001005 -
Pumo281g00007 130 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pumo281g00007 130 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pumo281g00007 130 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pumo281g00007 130 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pumo281g00007 130 Gene3D - 13 66 - -
Pumo281g00007 130 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 128 - -
Pumo281g00007 130 FunFam MYB-related transcription factor 13 66 - -
Pumo281g00007 130 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pumo281g00007 130 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo281g00007 1 130 MYB Transcription Factor Family AT5G15310 86.923 4.12e-84 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pumo281g00007 Myb_DNA-binding 2.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo281g00007 K09422 - gmx:100792994 269.24