Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo276g00001 ATGAAGAAGCTTTCTCTTTATGCTTGTTTACTCCATTTGAGTCTCTTGGTTCTTCTTCCCTACAGCAAAGCCAGTCAGGCTGATAAACTTCAAGAGTTGATTCTGTCTAAGAGCTCACAGCAGAAGCCTCCAGTGACCCTTTCATGGGCAGAGGAAGATGCAGTGAAAACTCACTCTTCTGCTTATGTTGCACCTCAAGAGGGGCAAAAGGAAGCTGACAAGATTGTGGCATTGCCTGGCCAGCCCTATGGGGTGAATTTTGACCAATATTCAGGCTATGTCACTGTTGATCCAAATGCTGGAAGAGCACTTTTCTATTATTTTGTGGAGTCTCCATATAACCCTTCAACTAAACCTTTAGTTTTGTGGCTAAATGGAGGACCTGGTTGTTCCTCATTGGGGTATGGTGCCTTTGAGGAGTTGGGACCTTTCAGAATAAACTCTGATGGCAAAACACTATATCGCAACAAATATGCTTGGAATGAAGTGGCAAATGTGCTGTTCTTGGAATCCCCTGCTGGTGTGGGCTTTTCCTACTCAAACACTACTTCTGACTATGATCATTCAGGAGATAAGTCTACTGCTAAAGATGCCTATGTTTTCCTCATCAATTGGCTAGAGAGGTTTCCAGAGTACAAAACCCGCGATTTTTACATAACTGGAGAGAGCTATGCTGGCCATTATGTGCCTCAGCTTGCATACACTATTTTGGTGAACAATAAATTCAGTCAACAAAGCATTAACCTCAAAGGCATTGCTATAGGGAATGCTTGGATTGATGATGTTACAAGTTTAAAGGGGATATATGATTACATTTGGACTCATGCTTTGAGCTCGGATCAAACACATGAGTTGATTGAGAAGTACTGCGATTTCACTTCTGAAAGAGTTTCGGCAATATGTAGCAATGCAACTAGAACGGCCTTTGAGGAGAATGGAGACATAGACCCTTATAACATCTATGCACCACTGTGTCACGACTCTTCTCTCAAAAATGGATCAACTGGTTCTGTATATGATTTTGACCCGTGTTCTGATTACTACGGGGAAGCCTATCTAAATAGGCCAGAGGTCCAACTAGCTCTTCATGCAAAACCCACAAACTGGACCCACTGCAGTAATTTAATAGACTGGAACGACCGCCCAGCTACCATCCTACCCATCATCAAGTATCTCATCGACAATGATGCTTTCTTCTACAGTGGAGATACTGATTCAGTGGTACCAGTCACATCTTCCAGATATTCAATCAACACCCTCAACCTCCCTATCCAGGCTCCTTGGCGTCCATGGTATTCTGGAAATGAGGTTGGAGGATATGTGGTGAAATACAACGGAGTGACATTTGTTACAGTAAGAGGAGCAGGACATCTGGTTCCAAGCTGGCAACCAGCACGGGCTCTGACTTTGATCTACTCATTCCTCTATGGAAGCCTTCCTCCTGCTTCACCATGGAAGGGTTACTAA 1467 0.4356 MKKLSLYACLLHLSLLVLLPYSKASQADKLQELILSKSSQQKPPVTLSWAEEDAVKTHSSAYVAPQEGQKEADKIVALPGQPYGVNFDQYSGYVTVDPNAGRALFYYFVESPYNPSTKPLVLWLNGGPGCSSLGYGAFEELGPFRINSDGKTLYRNKYAWNEVANVLFLESPAGVGFSYSNTTSDYDHSGDKSTAKDAYVFLINWLERFPEYKTRDFYITGESYAGHYVPQLAYTILVNNKFSQQSINLKGIAIGNAWIDDVTSLKGIYDYIWTHALSSDQTHELIEKYCDFTSERVSAICSNATRTAFEENGDIDPYNIYAPLCHDSSLKNGSTGSVYDFDPCSDYYGEAYLNRPEVQLALHAKPTNWTHCSNLIDWNDRPATILPIIKYLIDNDAFFYSGDTDSVVPVTSSRYSINTLNLPIQAPWRPWYSGNEVGGYVVKYNGVTFVTVRGAGHLVPSWQPARALTLIYSFLYGSLPPASPWKGY 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo276g00001 488 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 75 464 IPR001563 GO:0004185|GO:0006508
Pumo276g00001 488 ProSitePatterns Serine carboxypeptidases, histidine active site. 447 464 IPR033124 GO:0004185
Pumo276g00001 488 Pfam Serine carboxypeptidase 79 475 IPR001563 GO:0004185|GO:0006508
Pumo276g00001 488 FunFam Carboxypeptidase 69 327 - -
Pumo276g00001 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 205 230 IPR001563 GO:0004185|GO:0006508
Pumo276g00001 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 156 168 IPR001563 GO:0004185|GO:0006508
Pumo276g00001 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 179 IPR001563 GO:0004185|GO:0006508
Pumo276g00001 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 447 460 IPR001563 GO:0004185|GO:0006508
Pumo276g00001 488 ProSitePatterns Serine carboxypeptidases, serine active site. 219 226 IPR018202 GO:0004185
Pumo276g00001 488 Gene3D alpha/beta hydrolase 69 327 IPR029058 -
Pumo276g00001 488 FunFam Carboxypeptidase 385 477 - -
Pumo276g00001 488 SUPERFAMILY alpha/beta-Hydrolases 76 477 IPR029058 -
Pumo276g00001 488 Gene3D - 344 377 - -
Pumo276g00001 488 Gene3D - 385 477 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo276g00001 341 478 Calmodulin-binding Proteins AT2G22960 30.201 9.15e-14 68.2