Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo271g00019 ATGGCAAGTCTTGTACTTATCCACAAAATTATGCTTCATCTTTGGTTTGTTGCTTGGATGTGCTTAGGTATATGCTCAGCCCAATTGTCTTACGACCAAAGTAATTGTACTTCAAATGAAACTGGGCTAGGGACAAGATACAGTTGCAAGTCAACACAGGATTCATGCAAAACATTCTTGGTGTATAGAGCTCATAAGCATTTCAATACCATTTCAGAAGTGTCAAAGCTCTTCAACATGAACTCTGATGAGGTGCTTCAAAAAAACAACCTCCCATCTTCCTCTTTGTCTGAGGCACTCAAACAAGGTAAAGAGGTGCTTATTCCTGTTAATTGCACCTGCTCAGGCCAGTATTTTCAAGCCAGTTTAAGCTACAAAGTCCTTAACAACACAACATATTCCGAGATTGCTTGTGGTGTTTTTGAAGGGCTGCTGAAACATCTCACACTGGCTGAGGAGAACCTTTCACAAGGTAATAAGCCAGAAGCTGGTTCTGAGCTTCATGTGCCTCTCATATGTGCTTGTCCTGACAGCTACAATTTCACCAGGAGCAAGAAGGTGAAGTACCTTGTCACATACCCTCTTATACTGGGAGATGATCCAGACAAAGTTAGTGAAAAATTTGGCATCTCACCTGAAGAATTCTATGCAGTTAATAACTTGAATCCCTTGTCAACTGTTTTTCCTGATACAGTTGTTTTAGTTCCACTAAAGGATGGTCCAGTCAGAATACTTGATATTCCTGATTCTCCTTCTCCACCTCCTGGCTTTCTTCCCACAAATCCAGTGGTTATGACCGAGGAATCCACACAACCATCAAATTTGTACATTGCAGGATCTGTTATAGGATTTTTTTTGTTCATAACATTGCTTGCAAGCGGATTGTACATGAAGAGAATGAGGAAAAGTGATGTTGTCCATTCCTTTAGTCAAACAAACTCCCTCACTTTGTGGACACCAACTAGAAGCTCTCATATATCTACCCAAACGGGTAAAAGCTCTACAACCTGGTGCCTTTCCCCAGATCTTCTTGTTGGAATAAAGTACTACTTACTCAATTACAGCATAGAAGAGCTTCAAAAGGCCACCAAGAATTTCAGTGAAGAGAACAAGATCTGTCACAACCGGGGTTGTGACGGCGACTTTGTCTACAAGGGCTCAGTCAATGATCATGAGGTGATGATAAAGAGGATGAGGTTGGAAGACACACAACAGGTGATTGATTTACATTCTAAAATCAACCACATTAACATTGTGAACTTGCTTGGTGTTTGTTATGGTGAGAGCAATAATGATTCATGGTCTTATTTAGTTTTTGAGTTTCCTAAAAATGGATGCTTGAGGGACTGCGTATCTGATCCATGCAACCCTCTAAATTGGTACAAACGGACACAAATAGCCTTTGATATTGCAACATGTCTTTACTATTTACATTGCTGTTCTTTTCCTTCCTATGCTCACATGAATGTTAGTAGTAGAAATATATTCATAACAGCAAACTGGAGGGGAAAACTGGCAGATGTTGGAAGGGCATTGGCTGCTAGTGCCACACTCACCAAAAGAAATGATGGTATGGAAATTCCCAAAGGGGTGGTGGCACCAGAGTTCCTCTTACATGGCTCAGTTTCTGAAAAGGTTGACATTTTTGCATTTGGGGTTGTTTTGCTTGAGTTGATCTCAGGAAAAGACAACTTTGATGGAAAACCAATCAAAGATTACCTTGGATTTTTGTTGGGGGAAGCCAGTGAAGGGGGTTGTTTTGAAGGGTTAAGGAGTTTCATGGATCCTAATCTGAAGGATTACTCTCTTCCAGAGGCTTTATGTTTGTCTTTCTTAGCAAAGGATTGTGTGGCAGATGATCCCCAGCATAGGCCAACTATGGATGATATCATGAAAGTCCTTGCAAAAATGGTTTAG 1917 0.4069 MASLVLIHKIMLHLWFVAWMCLGICSAQLSYDQSNCTSNETGLGTRYSCKSTQDSCKTFLVYRAHKHFNTISEVSKLFNMNSDEVLQKNNLPSSSLSEALKQGKEVLIPVNCTCSGQYFQASLSYKVLNNTTYSEIACGVFEGLLKHLTLAEENLSQGNKPEAGSELHVPLICACPDSYNFTRSKKVKYLVTYPLILGDDPDKVSEKFGISPEEFYAVNNLNPLSTVFPDTVVLVPLKDGPVRILDIPDSPSPPPGFLPTNPVVMTEESTQPSNLYIAGSVIGFFLFITLLASGLYMKRMRKSDVVHSFSQTNSLTLWTPTRSSHISTQTGKSSTTWCLSPDLLVGIKYYLLNYSIEELQKATKNFSEENKICHNRGCDGDFVYKGSVNDHEVMIKRMRLEDTQQVIDLHSKINHINIVNLLGVCYGESNNDSWSYLVFEFPKNGCLRDCVSDPCNPLNWYKRTQIAFDIATCLYYLHCCSFPSYAHMNVSSRNIFITANWRGKLADVGRALAASATLTKRNDGMEIPKGVVAPEFLLHGSVSEKVDIFAFGVVLLELISGKDNFDGKPIKDYLGFLLGEASEGGCFEGLRSFMDPNLKDYSLPEALCLSFLAKDCVADDPQHRPTMDDIMKVLAKMV 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo271g00019 638 ProSiteProfiles LysM domain profile. 191 235 IPR018392 -
Pumo271g00019 638 Gene3D Transferase(Phosphotransferase) domain 1 443 638 - -
Pumo271g00019 638 Pfam Protein tyrosine and serine/threonine kinase 390 633 IPR001245 GO:0004672|GO:0006468
Pumo271g00019 638 SUPERFAMILY Protein kinase-like (PK-like) 348 634 IPR011009 -
Pumo271g00019 638 ProSiteProfiles Protein kinase domain profile. 285 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo271g00019 638 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 18 637 - -
Pumo271g00019 638 Gene3D Phosphorylase Kinase; domain 1 347 441 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo271g00019 47 638 Receptor kinase-like Gene Family AT2G23770 29.180 2.18e-67 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pumo271g00019 PK_Tyr_Ser-Thr 2.6e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo271g00019 - - gmx:100818937 1151.73