Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo271g00014 ATGCCCTTAGGCACGACCATACATAACATAGAAATCACACTCGGAAAGGGTGGACAATTAGCTAAAGCAGCAGGTGCTGTAGCAAAACTAATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAACTGCTCAGCAACAGTCGGACAAGTGGGAAATGTTGGAGTAAACCAGAAAAATTTAGGTAGAGCCAGATCTAAATGTTGGCTAGGTAAGTGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTATAGACCATCCGAATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAAACTTGCAACTCCTTGGGGTTTTCCTACACTTGGAAGAAGAAGTAGAAAAAGGAAGAAATATAGTGATAATTTGATTCTTCATCGTCGTACTAAATAG 429 0.4219 MPLGTTIHNIEITLGKGGQLAKAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKNLGRARSKCWLGKCPVVRGVVMNPIDHPNGGGEGRAPIGRKKLATPWGFPTLGRRSRKRKKYSDNLILHRRTK 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo271g00014 142 NCBIfam 50S ribosomal protein L2 1 141 IPR005880 GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740
Pumo271g00014 142 FunFam 50S ribosomal protein L2 1 61 - -
Pumo271g00014 142 SMART Ribosomal_L2_C_2 1 119 IPR022669 GO:0003735|GO:0005840|GO:0006412
Pumo271g00014 142 ProSitePatterns Ribosomal protein L2 signature. 84 95 IPR022671 GO:0003735|GO:0005840|GO:0006412
Pumo271g00014 142 Gene3D - 1 62 IPR014722 -
Pumo271g00014 142 PANTHER RIBOSOMAL PROTEIN L2 1 139 IPR002171 GO:0003735|GO:0005840|GO:0006412
Pumo271g00014 142 MobiDBLite consensus disorder prediction 122 142 - -
Pumo271g00014 142 SUPERFAMILY Translation proteins SH3-like domain 1 139 IPR008991 -
Pumo271g00014 142 MobiDBLite consensus disorder prediction 116 142 - -
Pumo271g00014 142 Pfam Ribosomal Proteins L2, C-terminal domain 1 117 IPR022669 GO:0003735|GO:0005840|GO:0006412
Pumo271g00014 142 Gene3D Ribosomal protein L2, domain 3 63 141 IPR014726 -
Pumo271g00014 142 MobiDBLite consensus disorder prediction 92 111 - -
Pumo271g00014 142 FunFam 50S ribosomal protein L2 62 142 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo271g00014 1 101 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 41.071 7.53e-19 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo271g00014 K02886 - gmx:3989337 240.736