Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo268g00013 ATGGCGGGGTTATTCTCATTAGGCGGAGGGAGAGGCAGCAACAACAACAACCAACAAGATAACAACAACCAGAGCGAGATTCCCCCAGCGGAGACCCTATTCTGGTACAGCAAAAACGACGACGTTTCGTCCTACCACCACCGAGGGTTTGAGCTATGGAACCAACAGGAGCAGCACGTGATGCAGCATCATCCGCATGCGCGTCCCCTCCTGCAGCGAGATCTTTACTCCTCCGGCGTGGGGCCCAGCAGGGGCCTCTCCGATGACCACTCGTCGTCGAGATCAGCCTTCGTGGCGATGCGCGCGGCGGAGGGGGGAATAAGCTGCCAGGACTGCGGGAACCAAGCCAAGAAAGACTGCCCTCACATGCGGTGCAGGACGTGCTGCAAGAGCCGCGGCTACGAGTGCCAAACCCATGTGAAAAGCACATGGGTTCCGGCTTCCAAACGCCGCGAGCGTCACCAGACGCTCGCGGCGTTACAGGAGCAGCAGCAACAACAACAGAGAGACATTTCCAAACGGCCGAGAGACCCGACCGCTTGCACTCGCTTGCCCTCGTCGTCAGGGTTAGAGGAAGGGCATTTTCCTACTGTGGTGAGTTCTCCTGCGGAGTTCAGGTGCGTAAGGGTTAGCTGTGTGGAGGACGCTGATGATAGGTATGCATATCAAACGGCTGTGAACATTGGAGGACATGTGTTCAAAGGAATCCTCTATGACTATGGTCCTGAGAGTGGCAACAATAATAATAACAGTAATAATAGCAATAATAATTACATGGCTGGGGAAACCTCTGCTGGTGTTGCTGGAGCTGCTCAGGCCTTGAACCTCACTGCTTCTGCTGCACTTGTTGATCCTTCCTCCTTGTATCCGGTTAACACTTTCATGGCGGGTAGTGGTACGCAATTCTTCCCTCACACAAGATCTTGA 927 0.5448 MAGLFSLGGGRGSNNNNQQDNNNQSEIPPAETLFWYSKNDDVSSYHHRGFELWNQQEQHVMQHHPHARPLLQRDLYSSGVGPSRGLSDDHSSSRSAFVAMRAAEGGISCQDCGNQAKKDCPHMRCRTCCKSRGYECQTHVKSTWVPASKRRERHQTLAALQEQQQQQQRDISKRPRDPTACTRLPSSSGLEEGHFPTVVSSPAEFRCVRVSCVEDADDRYAYQTAVNIGGHVFKGILYDYGPESGNNNNNSNNSNNNYMAGETSAGVAGAAQALNLTASAALVDPSSLYPVNTFMAGSGTQFFPHTRS 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo268g00013 308 MobiDBLite consensus disorder prediction 1 26 - -
Pumo268g00013 308 NCBIfam putative zinc finger domain, LRP1 type 108 150 IPR006510 -
Pumo268g00013 308 MobiDBLite consensus disorder prediction 9 26 - -
Pumo268g00013 308 Pfam Domain of unknown function (DUF702) 106 243 - -
Pumo268g00013 308 MobiDBLite consensus disorder prediction 153 195 - -
Pumo268g00013 308 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 291 IPR007818 GO:0003700|GO:0006355
Pumo268g00013 308 NCBIfam LRP1 C-terminal domain 194 242 IPR006511 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo268g00013 1 308 C2H2 Transcription Factor Family AT3G51060 44.149 3.22e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Pumo268g00013 DUF702 1.4e-63 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo268g00013 - - gmx:100789129 451.825