Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo268g00003 ATGGCTTTCTTGTTCATCATCTCACTGATGCTACTGCTTATTTCACTGTCTCTACTCCGAAGAAAGAAACCATACCCACCGGGCCCAAGAGGCCTACCCATAATTGGCAACATGAACATTATGGACCAACTCACACACAGAGGCTTGGCGAATCTAGCGAAGCAATACGGCGGCGTTTTTCACCTCCGCATGGGGCTCATCCACATGGTGGCGATTTCAAATGCGGAAGCGGCGCGTGAAGTGCTCCAAGTCCAAGACAACATCTTCTCCAACCGCCCCGCGACCATCGCCATCAGCTACCTCACCTACGACCGCGCCGACATGTCGTTCGCGCCCTACGGCCCCACGTGGCGCAAGATGCGCAAGCTCTGCGTCACGAAGCTCTTCAGCCGCCACCGCACTGCGTCGTGGAACTCCGTCAGAGACCAAATTCGCACCGTCGTTTCTACCTTAGGGTCCCACACCGGCCAGAACGTGAACGTCAGAGACGTGCTTTTCAACCTAACCAAGAGCATCGTTTACCGCGCCGCGTTTGGGTCGCGCTTGGAGGAAGGGGAGGGCGAGTTCGTTGCGATTCTTCAGGAGTTCTCGAAACTGTTTGGGGCTTTCAATGTTGCTGACTTTTTTCCCTTTCTCGCGTGGGTTGACCCCCAGGGGTTCAACCGCAGGCTCGTTGAAGCTCGTGCCACGTTGGACGGTTTCATCGACAGGATTATTGAGGAACATGTGCGGAAGAAGAGCGACCACGGCGGTGGCTGTCGCGAAGAAAGGGACATTGTTGATGAGATGTTGGCACTCTACGGTGATGAGGTTAAATTGAATGAATCGGACGATGGGCAGGGTGCTGTCAAATTGACGAAGGATAATATCCGCGGCCTTATCATGGACGTGATGTTCGGAGGAACGGATGCAGTGGCAGTGGCGATGGAGTGGGTAATGGCGGAGCTAATGAGAAACCCTAATGATCTGAAGCGCGTGCAGCAAGAACTCGCCGACGTGGTGGGCCTCCACCGCCACGTGGAGGATTCCGACATCGAGCGCCTCAGCCATCTCAAATGCGCCATCAAGGAGACACTGCGGCTGCACCCGCCGATCCCGCTGCTCCTCCACGAGACGGCGGAGGACGCGGCGGTGGCCGGCCACTTCGTCCCAAGGAAGTCGCGCGTGCTGGTAAACGCATGGGCCATCGGCAGGGACAGCGCGTGCTGGGAGGACCCGCACGCTTTCAGGCCCTCGAGGTTCCTGAACCCGCACGTGCCGGATTTAAAAGGGTGCAGCTTCGAGTTTGTTCCGTTCGGGTCGGGTCGGAGGTCCTGCCCCGGAATGCAACTGGGTATGTACATAATGGAGGTGGCGGTGGCGCACTTGCTTCACTGCTTCACGTGGGAGTTACCCGATGGGATGAAGGCGAGTGAGATGGACATGGGTGACGTGTTTGGACTCACCGCGCCCAGGGCGAGTCAACTCGTTGCTGTACCTAGGAAGCGCTTGGTGTGCCCTCTCTAA 1506 0.5737 MAFLFIISLMLLLISLSLLRRKKPYPPGPRGLPIIGNMNIMDQLTHRGLANLAKQYGGVFHLRMGLIHMVAISNAEAAREVLQVQDNIFSNRPATIAISYLTYDRADMSFAPYGPTWRKMRKLCVTKLFSRHRTASWNSVRDQIRTVVSTLGSHTGQNVNVRDVLFNLTKSIVYRAAFGSRLEEGEGEFVAILQEFSKLFGAFNVADFFPFLAWVDPQGFNRRLVEARATLDGFIDRIIEEHVRKKSDHGGGCREERDIVDEMLALYGDEVKLNESDDGQGAVKLTKDNIRGLIMDVMFGGTDAVAVAMEWVMAELMRNPNDLKRVQQELADVVGLHRHVEDSDIERLSHLKCAIKETLRLHPPIPLLLHETAEDAAVAGHFVPRKSRVLVNAWAIGRDSACWEDPHAFRPSRFLNPHVPDLKGCSFEFVPFGSGRRSCPGMQLGMYIMEVAVAHLLHCFTWELPDGMKASEMDMGDVFGLTAPRASQLVAVPRKRLVCPL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo268g00003 501 CDD CYP71-like 55 489 - -
Pumo268g00003 501 ProSiteProfiles ABC transporter integral membrane type-2 domain profile. 1 22 IPR047817 -
Pumo268g00003 501 FunFam Cytochrome P450 84A1 18 495 - -
Pumo268g00003 501 Gene3D Cytochrome P450 18 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo268g00003 501 Pfam Cytochrome P450 26 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo268g00003 501 PANTHER CYTOCHROME P450 84A1-RELATED 3 501 - -
Pumo268g00003 501 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo268g00003 501 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo268g00003 501 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo268g00003 501 SUPERFAMILY Cytochrome P450 26 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo268g00003 501 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo268g00003 501 PRINTS E-class P450 group I signature 168 186 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo268g00003 501 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo268g00003 501 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo268g00003 501 PRINTS E-class P450 group I signature 77 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo268g00003 501 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo268g00003 501 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo268g00003 501 PRINTS E-class P450 group I signature 53 72 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo268g00003 501 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo268g00003 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo268g00003 33 501 Monolignol Biosynthesis Gene Families AT4G36220 65.116 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo268g00003 K09755 - gmx:100807448 723.391