LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo267g00003	ATGGTGAAATTCCCAGCACATTTGAAGAGCTTTCAAGCCTGTTGGGGTGCAATTTCTCAGTACAATAACCTCTCTGGACCTATTCCTTCCACTAAAATTTTCCAAAATATGCTTGTAAGCAGCTTCATTGGTGGTAACAACAGCCTCTGTGGTGCACCTCTTGGTGACTGCAGCGATCCAGCTTCTCGCTCTGATACTCGTGGGAAAAGTTTTGATTCTCCTCGAGCTAAAGTAGTCATGATCATTGCAGCTTCTGTTGGAGGTGTTTCACTCATTTTCATTTTAGTTATTTTATATTTTATGAGACGTCCTCGGGAGTCAATTGATTCCTTTGGAAGCACTGAGCCTCCCTCCCCAGATTCAGATATCTATTTACCTCCAAAGGAAGGTTTCACTTTCCATGATCTAGTTGAAGCTACGAAAAGATTTCATGAAAGCTATGTTATTGGTAAGGGAGCATGTGGAACCGTTTATAAGGCAGTGATGAAATCTGGTAAGACCATTGCTGTTAAGAAGTTAGGATCTAACAGGGAAGGGAACAGCATTGAGAATAGTTTCAGGGCTGAAATATCGACTCTGGGAAGGATAAGGCATCGGAATATAGTGAAATTATATGGCTTTTGCTATCACCAAGGTTCCAATCTCCTGCTTTATGAGTATATGGAAAGAGGTAGCTTAGGTGAACAATTGCATGGTTCTGCAACTAATTTGGAGTGGCCAACTCGGTTCATGATTGCTCTTGGAGCTGCTGAGGGTCTTGCCTACTTGCATCATGACTGCAAACCAAAGATTATTCACCGCGATATAAAATCTAACAACATTCTGCTGGATGAAAATTTTGAGGCCCATGTTGGTGATTTTGGTTTGGCAAAAGTGATTGACATGCCCCAGTCAAAATCAATGTCTGCTGTTGCTGGATCTTATGGCTATATTGCTCCTGAATATGCATATACCATGAAGGTCACAGAGAAGTGTGACATTTATAGCTATGGTGTTGTGCTCTTGGAATTGATAACTGGAAGAGCTCCAGTTCAGCCACTAGAGCAAGGAGGTGATCTTGTCACATGGGTGAGGAACCATATCCGGGACCACAACAACACATTGACACCGGAGATACTCGACAGTCGCATAGATCTTGAAGACCAAACCACTGTGAATCACATGCTCACTGTTCTGAAGCTTGCTTTACTCTGCACAAGTGTGTCTCCTACCAAGAGGCCATCAATGCGGGAAGTTGTGTTGATGCTTATCGAGTCGAACGAGCGAGAAGGGAACTTAACACTCACTCAAACTTACCATGATCTTCCTTCCAAAGATGGCATGTGA	1326	0.4291	MVKFPAHLKSFQACWGAISQYNNLSGPIPSTKIFQNMLVSSFIGGNNSLCGAPLGDCSDPASRSDTRGKSFDSPRAKVVMIIAASVGGVSLIFILVILYFMRRPRESIDSFGSTEPPSPDSDIYLPPKEGFTFHDLVEATKRFHESYVIGKGACGTVYKAVMKSGKTIAVKKLGSNREGNSIENSFRAEISTLGRIRHRNIVKLYGFCYHQGSNLLLYEYMERGSLGEQLHGSATNLEWPTRFMIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELITGRAPVQPLEQGGDLVTWVRNHIRDHNNTLTPEILDSRIDLEDQTTVNHMLTVLKLALLCTSVSPTKRPSMREVVLMLIESNEREGNLTLTQTYHDLPSKDGM	441

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo267g00003	441	ProSiteProfiles	Protein kinase domain profile.	143	417	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pumo267g00003	441	PANTHER	LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1	18	417	-	-
	Pumo267g00003	441	FunFam	Leucine-rich repeat receptor-like serine/threonine-protein kinase	112	220	-	-
	Pumo267g00003	441	Gene3D	Phosphorylase Kinase; domain 1	117	220	-	-
	Pumo267g00003	441	FunFam	Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230	221	433	-	-
	Pumo267g00003	441	Gene3D	Transferase(Phosphotransferase) domain 1	221	434	-	-
	Pumo267g00003	441	Pfam	Protein kinase domain	144	413	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pumo267g00003	441	SMART	serkin_6	143	416	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pumo267g00003	441	SUPERFAMILY	Protein kinase-like (PK-like)	119	416	IPR011009	-
	Pumo267g00003	441	Gene3D	Ribonuclease Inhibitor	4	65	IPR032675	-
	Pumo267g00003	441	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	264	276	IPR008271	GO:0004672\|GO:0006468

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo267g00003	4	418	Receptor kinase-like Gene Family	AT5G65700	46.043	7.23e-106	334

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XI-1	Pumo267g00003		Pkinase	2e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo267g00003	-		-	gmx:100805792	805.053