Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo266g00006 ATGGGATGGAGGGAGGCACTTTGTGAGGCTGCTCGCATCTCAATGGTTGCAGACTTATATTTCAGTGGAGAAAAGCCAATGATGTTTGCTGATAAGATAGATCTCCTGAAGCATTGGAGGAAGGGACTTTGTGAGGCTGCTGGCATCTCAGGGGTTGTAGACTTAAATTCCAGTGGAGAAATGGAGATGGCTAATAAGATAGATCTCCTCTTGAAGCATTGGAGGGAGGCACTATGTGAGGCTGCTGGCATCTCAGAGGGTGCAGTCTTAAATTCCAGTGTCGAAATGGAGATGGCTAATAATGAGATAGACCTCCTCATGAAGCATTGGAGGGAGGCAATTCATAAGGCCAGTCACATCTCAAGATATGTAGTCCTAAATTCCAGAGGAGAAATGGACACAGCTAATGAGATAAACCACCTCGTGGAGCGGTGGACGGAGGCACTTCGTGAGGCTGCTAACATCGCAGGGGTTGTAGTCCTCAATTCCAGGAATGAAAATGAGGCTATCAAAAATATTGTTGAAAATGTTGCACGTTTGTTAGACAAGACAGAGTTGTTCGTTACTGATAATCCAGTGGGAGTAGAACCTCGAGTGCAAGAAATGATTCAGCTGCTAGACCAGAAACAATCAAACAATGTTCTACTACTAGGGATGTGGGGGATGGGAGGCGTTGGTAAAACAACAATTGCAAAAGCCATTTACAATAAGCTTGGCTGCAATTTTGAGGGAAGGAGCTTCCTTGCACATATTAGGGAAGATTGGGGGCAAGACTCTAGCCAAGTCTATTTACAAGAACAACTTCTATTTGATATTAACAAAGAAACAAATACAAAGATACGTAATGTTGAATCAGGAAAAATCATATTAAAGGAAAGACTTCGCTATAAGAGGGTACTTCTTATACTTGATGATGTGAATGAACTCAACCAATTGAATGTTTTGTGTGGAAGTCGTGAATGGTTTGGTCCAAGGAGTAGAATAATCATCACAACCAGATATATGAGTATACTTAGAAGGGGTGGAGTTGACAAAGTGTACAAAATGAAAGGAATGAATGAAGTTGAATCAATTGAGCTTTTTTGTTGGCATGCATTCAAGCAAGCAAGTCCTAGAGTAGATTTTATTGAACTTTCTAGAAATGTAGTTGCATATTCTGGAGGATTGCCACTAGCTCTTGAAGTCCTTGGGTCCTATTTGTTTGATATGGAGGTAACAAAATGGAAAAGTGTATTAGAGAAACTTGAGAGAATTCCTAATGATCAAGTACAAAAAAAGTTAAAAATAAGCTATGATGGTTTAAGTGATGATACCGAGAAGGAAATATTCCTTGACATAGCTTGTTTCTTTATTGGAATGGATCGATATGATGTTATACGCATATTAAATGGTTGTGGACTTTTCGCAGAAAATGGAATACGTGTCCTTCTAGAGCGAAGCCTTATAACTGTTGATGATAAGAACAAGCTTGGAATGCATGATTTGCTACGAGACATGGGAAGAGAAATTATTCGTGCAAAATCACCAAAGGATCCTGAGGACCGTAGTAGGTTATGGTTTCGTAAGGATGTGCTTGATGTATTATCAAAAGAAATTGGAACAAAAGCTATTGAGGGACTGGCTTTGAAGTTACCAGGAACTAATACTAAATGTTTGAGCACTAAAGCTTTTAAGAAGATGAAGAAACTTAGGCTGCTTCAACTTGATGGTGTAGAACTTGTTGGAGATTTTGAATATCTTTCCAGAGATCTTAGATGGCTTTGTTGGCATGGATTTCATTTTACATGCATACCAACAAACTTTTATCAAGGAAGTCTAGTTTCCATTGAGTTAGAAAATAGTAAGATTACAATTATGTGGACAGAGGCCCAGGTATTAATTTAG 1884 0.3917 MGWREALCEAARISMVADLYFSGEKPMMFADKIDLLKHWRKGLCEAAGISGVVDLNSSGEMEMANKIDLLLKHWREALCEAAGISEGAVLNSSVEMEMANNEIDLLMKHWREAIHKASHISRYVVLNSRGEMDTANEINHLVERWTEALREAANIAGVVVLNSRNENEAIKNIVENVARLLDKTELFVTDNPVGVEPRVQEMIQLLDQKQSNNVLLLGMWGMGGVGKTTIAKAIYNKLGCNFEGRSFLAHIREDWGQDSSQVYLQEQLLFDINKETNTKIRNVESGKIILKERLRYKRVLLILDDVNELNQLNVLCGSREWFGPRSRIIITTRYMSILRRGGVDKVYKMKGMNEVESIELFCWHAFKQASPRVDFIELSRNVVAYSGGLPLALEVLGSYLFDMEVTKWKSVLEKLERIPNDQVQKKLKISYDGLSDDTEKEIFLDIACFFIGMDRYDVIRILNGCGLFAENGIRVLLERSLITVDDKNKLGMHDLLRDMGREIIRAKSPKDPEDRSRLWFRKDVLDVLSKEIGTKAIEGLALKLPGTNTKCLSTKAFKKMKKLRLLQLDGVELVGDFEYLSRDLRWLCWHGFHFTCIPTNFYQGSLVSIELENSKITIMWTEAQVLI 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo266g00006 627 Gene3D - 351 435 IPR042197 -
Pumo266g00006 627 PRINTS Disease resistance protein signature 216 231 - -
Pumo266g00006 627 PRINTS Disease resistance protein signature 293 307 - -
Pumo266g00006 627 PRINTS Disease resistance protein signature 386 400 - -
Pumo266g00006 627 PRINTS Disease resistance protein signature 558 574 - -
Pumo266g00006 627 Gene3D Ribonuclease Inhibitor 521 624 IPR032675 -
Pumo266g00006 627 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 131 617 IPR044974 GO:0006952
Pumo266g00006 627 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 446 IPR027417 -
Pumo266g00006 627 SUPERFAMILY L domain-like 542 620 - -
Pumo266g00006 627 Gene3D - 180 343 IPR027417 -
Pumo266g00006 627 Pfam NB-ARC domain 197 431 IPR002182 GO:0043531
Pumo266g00006 627 SUPERFAMILY "Winged helix" DNA-binding domain 422 528 IPR036390 -
Pumo266g00006 627 Gene3D - 135 179 IPR035897 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo266g00006 143 620 WRKY Transcription Factor Family AT4G12020 32.587 1.85e-60 217