Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo266g00004 ATGTCTTCCAGGATGGCCTCTGAACCCACTCTTTACATCTATGATGTGTTTTTGAGTTTCAGAGGGGAAGACACGCGTGCTTCTTTCATTTCACATCTCTATGCCTCTCTTCAAAATGCCGGAATCATTGTTTTCAAGGATGACGAGTCACTTCCAAGGGGAGATCACATTTCAATGTCACTGCTGCGAACAATCGAACAGTCTCGAATTTCTGTTGTTGTTTTCTCAAGAAATTATGCAGAGTCACGCTGGTGTCAGCAAGAGTTGAGGAAAATAATGGAGTGTCACAGAACCACAGGGCAAGTGGTAGTGCCCGTGTTCTATGATGTTGATCCCTCTGAAGTACGTCATCAAACAGGTGAGTTTGGAAAAGCATTTCAAAACCTTTTGAACAGACTTTCAGAAGAGGGAGAAGATGTGCAGAAACTGAACAAGTTCATGCAGTTACGGAGGGAGGATCTTCGTGAGGCTGCTGGCATCTCAGGGGTTGTAGTCCTAAATTCCAGGAATGAAAGTGAGACAATCAAAAACATTGTTGAAAATGTTACACGTTTGTTAGACAAGACAGAGTTGTTTGTTACTGATAATCCAGTGGGCGTAGAACCTCGAGTGCAAGAAATGATTAGGTTGCTAGACCTGGCACTGTCAAATGATGTTCTACTACTAGGGATGTGGGGGATGGGAGGCATTGGTAAAACAACAATTGCAAAAGCCATATACAATAAGATTGGGCGCAATTTTGAGAGAAGGAGCTTCCTTGCACATATTAGGGAAGTTTGGGGGCAAGACGCTAGCCAAGTCAATTTGCAAGAACAACTTTTGTTTGACATTGACAAAGAAACAAAAACAAAGATACGTAATGTTGAATCAGGAAAAATCATATTAAAGGAAAGACTTTGCCATAAAAGGGTACTTCTTGTACTAGATGATGTGAATGAACTAGACCAATTGAATGCTTTGTGTGGAAGTTTTAAATGGTTTGGTCCAGGTAGTAGAATAATCATCACCACCAGAGATCAACATATACTTAGAGGGAATAGAGTTGACAAAATATACATAATGAAAGGAATGGATGAAAGTGAATCTATTGAGCTTTTTAGTTGGCATGCATTCAAACAAGCAAGTCCTAGAGAAAATTTTATCCAACTTTCTAGAAATGTAACTGCATATTCTGGGGGATTGCCATTAGCCCTTGAAGTGTTTGGGTGTTATTTGTTTGATATGGAGGTAACAGAGTGGGAGAATATATTGGAGAAACTCAAGAGAATTCCTAATCAGCAAGTACAAAAGAAGTTAAAAATAAGTTATGACGGTTTAAATGATGACACTGAGAGAGAAATATTCCTTGATATAGCTTGTTTTTTTATTGGGATGGACCGGAATGATGTTATACAAATACTAAATGGCTGTGGACTTTTCGCAGAAAATGGTATACGTGTCCTTGTAGAGCGAAGCCTTGTAAGTGTTGATGACAAGAACAAGCTTGGAATGCATGATTTGCTACGAGACATGGGAAGGGAAATCATTCGTGAGAAATCACCAAAGAATGTTGAGGAGCGTAGCAGGTTATGGTTTCCCGAGGATGTGCTTGATGTATTATCAAAAGAGATTGGGACAAAAGCTATTGAAGGATTGGCTTTGAAGTTACCAGGAAATAATACAAAATGTTTGAGCGCTAAAGCTTTTAAGAAGATGAAAAAACTCAGTAATGTTCAACTTGTGTGGAAAGATGCCCAGCTAATGGAGAATCTGAAAATTCTTAATCTTAGTCATTCTCATTATTTAACACAGACTCCAGACTTTTCGAATTTGCCTAATCTTGAAAAGCTAGAACTCATAGATTGTTCAAGGTTGTCAGAGGTTTCTCATACCATCGGACTTCTCAAAAAAGTTCTTCTAATAAATTTGAAAGATTGTATTAGCCTTCGTAACCTTCCAAGAAGTATCTATAAGTTGAAATATCTTAAAACACTAATTCTTTCAGGATGTTTAAAGATTGACAAGTTGGAAGAGGACTTAGAACAAATGCAGTCTTTGACAATCCTTGTTGCAGATAAGACTGCAATAACAACAGTGCCCTTTTCAATTGTAAGATCAAAAAGCATTGGATATATTTCTTTGTGTGGCTACGAAGGATTCTCACGTGATGTGTTTCCTTCTATCATTTGGTCTTGGATGTCACCAACCAATAGTCTCTCATCCCACATTCAAACATTTGCGGACATGTCATCTCTTGTTTCTTTAGATGTGCCAAATAGCAAATCCCATCATCTATTGTATATTTTTGAGGACCTTCTAAAGCTTCAAAGTCTTTGCATAGAGTGCGGCTCAAAACTTCAACTATCTCGAGATGCAAAACGCATTTTAGATGCTTTATATGCCATAAATTCTGAGGAATTGAATTCAACTGCAACTACATCACAAATGCAAAATATGAATTCTTTTACATTAATTGAATGCAACAGTCAAGTGCACATTTCACAATCAAAATGTTCATTGAGATCTCTTTTAATTCAGATGGGAATGAGTTGCCAAGTCACTCATATTCTTAAACAGAGCATTTTACAGAATATGAGTGCTAGTGAGTGCGGTGGTTGTGTGCTCCCTAGTGATAGTTATCCAGATTGGTTAACTTTCAACAGCAAAGGTTCTTCTGTGATTTTTGAAATCCCTCAAGTGAACGGACATAACTTGAAGACAATGATGTGTCATGTCCAGTATTCTTTACCAGACAATATAACATCAGATGGCCTGAAAAATTTGCTGGTGATAAATCACACAAAGACCACCATTCAGCTTTATAAGAGAGATGCATTAACCTCCTTTGAAGATAAGGAGTGGCAGAGGATACTATCAAATATTGAGCCTGATATTCAACCTCAACAGCAGGCACATCAGATTCCTTACACTCAACATTCACAGTTTCAAACTGTGTCATCTGCTTCAGTGCCTCCTATGAGTTCTCCACAAGCATACATCACTGACTCAAGCTTATCTCAGGCTCAAGTTCAACAATCTCAGAACTGGTTCATAAATTGTAGCGCTTCACACCATGTTACTCCAGAGCCATCTAATCCTGTGCAAGATGAACCAATTCAAGGCCAAGAGCATGTTTTCCCAAGCAATGGTCAAAGTTTGCCCATACAGTATCGTTTTGATCCCAATTATGTTGCTCGAAGCAATTTTCAGTTTCAGAATCATTTTGAGCAATGGATTAGTGGTTTTAGATGTAGATTGGTGGCTACTAATGCTCTGGTTGATAAAGCATGGGGTGCTGGGGAAGGTCCACTTCTCTTGACTAACATTCTCTTATTGAATAAGTGCATGTCATGTAAATTCTCTTGGGATCTTGGATTCCTCAAAAGCAAACTTGAGCTTGATTCAGAAGCCCTGGTTTTAATGCTTTAA 3408 0.3838 MSSRMASEPTLYIYDVFLSFRGEDTRASFISHLYASLQNAGIIVFKDDESLPRGDHISMSLLRTIEQSRISVVVFSRNYAESRWCQQELRKIMECHRTTGQVVVPVFYDVDPSEVRHQTGEFGKAFQNLLNRLSEEGEDVQKLNKFMQLRREDLREAAGISGVVVLNSRNESETIKNIVENVTRLLDKTELFVTDNPVGVEPRVQEMIRLLDLALSNDVLLLGMWGMGGIGKTTIAKAIYNKIGRNFERRSFLAHIREVWGQDASQVNLQEQLLFDIDKETKTKIRNVESGKIILKERLCHKRVLLVLDDVNELDQLNALCGSFKWFGPGSRIIITTRDQHILRGNRVDKIYIMKGMDESESIELFSWHAFKQASPRENFIQLSRNVTAYSGGLPLALEVFGCYLFDMEVTEWENILEKLKRIPNQQVQKKLKISYDGLNDDTEREIFLDIACFFIGMDRNDVIQILNGCGLFAENGIRVLVERSLVSVDDKNKLGMHDLLRDMGREIIREKSPKNVEERSRLWFPEDVLDVLSKEIGTKAIEGLALKLPGNNTKCLSAKAFKKMKKLSNVQLVWKDAQLMENLKILNLSHSHYLTQTPDFSNLPNLEKLELIDCSRLSEVSHTIGLLKKVLLINLKDCISLRNLPRSIYKLKYLKTLILSGCLKIDKLEEDLEQMQSLTILVADKTAITTVPFSIVRSKSIGYISLCGYEGFSRDVFPSIIWSWMSPTNSLSSHIQTFADMSSLVSLDVPNSKSHHLLYIFEDLLKLQSLCIECGSKLQLSRDAKRILDALYAINSEELNSTATTSQMQNMNSFTLIECNSQVHISQSKCSLRSLLIQMGMSCQVTHILKQSILQNMSASECGGCVLPSDSYPDWLTFNSKGSSVIFEIPQVNGHNLKTMMCHVQYSLPDNITSDGLKNLLVINHTKTTIQLYKRDALTSFEDKEWQRILSNIEPDIQPQQQAHQIPYTQHSQFQTVSSASVPPMSSPQAYITDSSLSQAQVQQSQNWFINCSASHHVTPEPSNPVQDEPIQGQEHVFPSNGQSLPIQYRFDPNYVARSNFQFQNHFEQWISGFRCRLVATNALVDKAWGAGEGPLLLTNILLLNKCMSCKFSWDLGFLKSKLELDSEALVLML 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo266g00004 1135 SUPERFAMILY L domain-like 497 799 - -
Pumo266g00004 1135 Pfam NB-ARC domain 205 436 IPR002182 GO:0043531
Pumo266g00004 1135 SMART till_3 13 156 IPR000157 GO:0007165
Pumo266g00004 1135 Pfam TIR domain 14 183 IPR000157 GO:0007165
Pumo266g00004 1135 PRINTS Disease resistance protein signature 391 405 - -
Pumo266g00004 1135 PRINTS Disease resistance protein signature 602 618 - -
Pumo266g00004 1135 PRINTS Disease resistance protein signature 221 236 - -
Pumo266g00004 1135 PRINTS Disease resistance protein signature 298 312 - -
Pumo266g00004 1135 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 693 IPR044974 GO:0006952
Pumo266g00004 1135 Gene3D - 184 351 IPR027417 -
Pumo266g00004 1135 Gene3D - 356 440 IPR042197 -
Pumo266g00004 1135 Gene3D - 12 183 IPR035897 -
Pumo266g00004 1135 ProSiteProfiles TIR domain profile. 12 186 IPR000157 GO:0007165
Pumo266g00004 1135 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 451 IPR027417 -
Pumo266g00004 1135 Gene3D Ribonuclease Inhibitor 532 869 IPR032675 -
Pumo266g00004 1135 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 188 - -
Pumo266g00004 1135 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 148 IPR035897 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo266g00004 14 696 WRKY Transcription Factor Family AT4G12020 28.384 1.46e-62 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo266g00004 - - ccaj:109804040 1365.52