Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo266g00003 ATGAAGAAACTCAGGTTGCTTCAACTTGCTGGTGTACAACTTGATGGAGATTTTGAATATCTTTCTAGAGATCTTAGATGGCTTTGCTGGCACGAATATCCTTTAAAATGCATACCGACAGACTTTTATCAAGGAAGCCTAGTTTCAATTGAGTTAAAGAACAGTAATGTTCAACTTGTGTGGAAAAAACCCCAGTGGTTGGAGAAGCTCAAAATTCTCAATCTTAGTCATTCTCATAATTTAACACAGAGCCCAGACTTTTCAAATTTGCCTAATCTTGAAAAGCTAGTGCTAATAGATTGTCCAAGGTTGTCTGAGGTTTCCCATACCATTGGACATCTCAATAAAATTCTTCTAATAAATTTGAAAGATTGTATTAGCCTTCACAACCTTCCAAGAAGTATCTATAGGTTGAAATCTCTTAAAACACTCATTCTTTCTGGATGCTTAAAGATTGACAAGTTGGAAGAGGACTTGGAACAAATGGAGTCTTTGACAATCCTTGTTGCAGATCAGACTGCAATAACCAAAGTTCCCTTTTCAATTGTAAGATCAAAAAGCATTGGATATATTTCTTTGTGCGGCTATGAAGGATTCTCACATCATGTGTTTCCTTCTATTATTTCATCTTGGATGTCACCAATGAGTAGTCTCTCATCCCGCATTCAAACATTTGCAAGCATGTCATCTCTTGTTTCTTTAGATGTGGCAAATAGTAGTTCTCATCATTTATCATCTATCTCCAAGGACCTTTCAAAGCTTCAAAGTCTTTGTGTAGAGTGTGAATATGAACTTCAACTATCTCAAGAGACAACAAGTATTTTAGATGCTTTACATGCCACAAATTCTAAGGAATTGGAATCAACTACAACTGCATCACTAATACCAAATATGAATGCTTTAACAGTAATTGAATGTAGCAATCAAGTGAACATTTCAGTATCAGAAAGTTCCTTGAGATCTCTTTTAATTCAAATGGGAAAGAGTTGCCAAATCACCCATATCTTAAACAGAGCATTTTACAGGAATGAAAGTGAGGCTATAAAAATCATTGTTGAAAATGTTACCCATTTGTTAGACAAGACAGAGTTGTTCGTTGCCGATAATCCAGTCGGAATAGAATCACGAGTACAAGATATGATTCAGCTGCTAGACCACAAACTATCAAATGGTGTTCTACTAGTAGGGATGTGGGGAATGGGAGGCATTGGTAAAACAACAATTGCAAAAGCCATTTACAATAAGATTGGCCGCAATTTTGAGGGAAGGAGCTTCCTTGCACAAATTAGGGAAGTTTGGGGGCAAGACGGTGGCCAGGTCTGTTTACAAGAACAACTTTTGTTTCATATCTACAAAGAAATGAAAATAAAGATATGTAATGTTGAATCAGGAAAAAATATATTAAGGAAAAGACTTTGCCATAAAAGGATACTTCTTGTACTTGATGATGTGAATGAATTAGACCAATTGAATGCTTTGTGTGGAAATCATAGATGGTTTGGTTCTGGGAGTAGAATAATCATCACAACCAGAGATAAGCATGTTCTTAGAGGGAAAAGAGTTGATAAAGTATACATGATGAAAGGGATGGATGAAAGTGAATCTATTGAGCTTTTTAGTTGGCATGCATTCAAGCAATCAAGTCCTAGAGAAGATTTTACCGAACTTTCTAGAAATGTAATTACATATTCCAGTGGATTGCCATTGGCTCTTGAAGTCCTTGGATGTTATTTGTTTGATATGGAGGTAACAGAGTGGAAGAGTGTATTGGAGAAACTCAAGAGAATTCCTAATGATCAAGTACAAAAGAAGTTAAAAATAAGCTATGATGGTTTGAGTGATGATACAGAGAGAGAAATATTCCTTGATATAGCTTGTTTCTTTATTGGAATGGACCGAAACGATGTTATACGTATATTAAATGATTGTGGACTTTTCGCAGAAAATGGAATACGTGTCCTTGTGGAACGAAGCCTTGTAACTGTTGATGATAAAAACAAGCTTGGAATGCATGATTTGCTACGAGACATGGGAAGAGAAATCATTCGTGCTAAATCACCAAAGGAGCCTGAGGAGCGTAGCAGGTTATGGTTTCATGAAGAGGTGCTTGATGTATTGTTAAAAGAAAGTGGAACAAAAGCTGTAGAGGGATTGACTTTGATGTTGCCAAGAACTAATACAAAATGTTTTAGTACTACATCCTTTAAGATGATGAAGAAACTCAGGTTGCTTCAACTTGCAAGTGTTGAACTTGATGGAGATTTTGAAAACCTATCAAGTGATTTGAGATGGCTATGTTGGCATGGATTTCCTTTAAAATACATACCGATGAACTTTTATCAAGGAAATTTAGTTTGCATTGAGCTAGAGAAGAGCAATGTCAGACTTGTGTGGAAAGAGGCCCAGATAATGGAGAAGCTGAAAATTCTCAATCTTAGTCATTGTCATTATTTAACACAGACCCCTGACTTTTCAAATTTGCCTAATCTTGAAAACCTAGTACTCGTAAATTGTCCAAAACTGTCTGAGGTTTCCCACACCATTGAACATCTCAAGAAAGTTCTTCTAATAAATTTGAAAGATTGTATTAGCCTACGTAACCTTCCAAGAAGTATCTATAAGTTGAAATCTCTTAAAACACTCATTCTTTCTGGGTGTTTAAAGATTGACAAGTTGGAAGAAGACTTGGAACAAATGGAATCTTTGACAATCCTTGTTGCGGATAAGACTGCAATAACAAGAGTGCCATTTTCAATACTTAGATAA 2766 0.359 MKKLRLLQLAGVQLDGDFEYLSRDLRWLCWHEYPLKCIPTDFYQGSLVSIELKNSNVQLVWKKPQWLEKLKILNLSHSHNLTQSPDFSNLPNLEKLVLIDCPRLSEVSHTIGHLNKILLINLKDCISLHNLPRSIYRLKSLKTLILSGCLKIDKLEEDLEQMESLTILVADQTAITKVPFSIVRSKSIGYISLCGYEGFSHHVFPSIISSWMSPMSSLSSRIQTFASMSSLVSLDVANSSSHHLSSISKDLSKLQSLCVECEYELQLSQETTSILDALHATNSKELESTTTASLIPNMNALTVIECSNQVNISVSESSLRSLLIQMGKSCQITHILNRAFYRNESEAIKIIVENVTHLLDKTELFVADNPVGIESRVQDMIQLLDHKLSNGVLLVGMWGMGGIGKTTIAKAIYNKIGRNFEGRSFLAQIREVWGQDGGQVCLQEQLLFHIYKEMKIKICNVESGKNILRKRLCHKRILLVLDDVNELDQLNALCGNHRWFGSGSRIIITTRDKHVLRGKRVDKVYMMKGMDESESIELFSWHAFKQSSPREDFTELSRNVITYSSGLPLALEVLGCYLFDMEVTEWKSVLEKLKRIPNDQVQKKLKISYDGLSDDTEREIFLDIACFFIGMDRNDVIRILNDCGLFAENGIRVLVERSLVTVDDKNKLGMHDLLRDMGREIIRAKSPKEPEERSRLWFHEEVLDVLLKESGTKAVEGLTLMLPRTNTKCFSTTSFKMMKKLRLLQLASVELDGDFENLSSDLRWLCWHGFPLKYIPMNFYQGNLVCIELEKSNVRLVWKEAQIMEKLKILNLSHCHYLTQTPDFSNLPNLENLVLVNCPKLSEVSHTIEHLKKVLLINLKDCISLRNLPRSIYKLKSLKTLILSGCLKIDKLEEDLEQMESLTILVADKTAITRVPFSILR 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo266g00003 921 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 357 624 IPR027417 -
Pumo266g00003 921 Pfam NB-ARC domain 374 609 IPR002182 GO:0043531
Pumo266g00003 921 SUPERFAMILY L domain-like 718 917 - -
Pumo266g00003 921 Gene3D - 355 524 IPR027417 -
Pumo266g00003 921 Gene3D Ribonuclease Inhibitor 713 921 IPR032675 -
Pumo266g00003 921 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 285 IPR044974 GO:0006952
Pumo266g00003 921 SUPERFAMILY L domain-like 2 323 - -
Pumo266g00003 921 Gene3D Ribonuclease Inhibitor 1 354 IPR032675 -
Pumo266g00003 921 PRINTS Disease resistance protein signature 471 485 - -
Pumo266g00003 921 PRINTS Disease resistance protein signature 564 578 - -
Pumo266g00003 921 PRINTS Disease resistance protein signature 394 409 - -
Pumo266g00003 921 PRINTS Disease resistance protein signature 802 818 - -
Pumo266g00003 921 SUPERFAMILY "Winged helix" DNA-binding domain 600 706 IPR036390 -
Pumo266g00003 921 Gene3D - 529 613 IPR042197 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo266g00003 342 919 WRKY Transcription Factor Family AT4G12020 33.833 4.58e-73 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo266g00003 - - gmx:100800964 947.192